Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq486 183 8e-41
>seq486
Length=217039
Score = 183 bits (202), Expect = 8e-41
Identities = 567/863 (66%), Gaps = 12/863 (1%)
Strand=Plus/Minus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|| || |||||||| ||| | ||||| || | || || ||||| || | || | ||
Sbjct 176524 GAGCGGCCGCAGCACATGCTGATGCGGGTGTCCATCGGCATCCACGGCGCCGACATCGAC 176465
Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAA 363565
||||| || || || || || || | | | ||| ||||||||||||| || |
Sbjct 176464 GCCGCCATCACCACCTACAACCTGCTC--TCCGAGAAGTACTTCACGCACGCCAGCCCCA 176407
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625
| ||| | || | || | || ||| | || || || || || | ||||
Sbjct 176406 CCCTGTTCTCGGCCGCCACCCCCCGCCCTCAGCTCTCCTCATGTTTCCTCATCGCCATGA 176347
Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685
||||||| |||||| ||||||| ||||| || ||| | ||||| | || |||||
Sbjct 176346 AGGACGACAGCATCGAAGGTATCTACGACACTCTGAAGCAGTGTGCATTAATATCCAAAT 176287
Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGT-TC-GTGCACAGAACAGTTACATTCG 363743
|| ||||| || || || || || || || || | || | || ||||| ||
Sbjct 176286 CCGCGGGCGGCATAGGAGT-TC-ATGTTCATTGCATCAGAGCGAAAGGCACCTACAT-CG 176230
Query 363744 CGG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802
||| ||| || ||| || |||||||| |||||||| || |||| |||| || |
Sbjct 176229 CGGGCACGAACGGCGTCTCCAACGGGCTGGTGCCCATGCTGCGCGTGTACAACAACACGG 176170
Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862
|| | ||||| |||||||| || ||||| || || || || | || |||||||
Sbjct 176169 CGCGCTACGTGGACCAGGGCGGCAACAAGCGGCCCGGCGCCTTCGCCGTCTACCTCGAGC 176110
Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922
| || || || || || ||||| || || | ||| |||||||| |||||||||
Sbjct 176109 CGTGGCACGCTGACATATTCGAGTTCCTAGACTTGAAGAAGAACACGGGCAAAGAGGAAG 176050
Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982
|||| || || || ||||||||||| || ||| | || || | || |||||| | || |
Sbjct 176049 TGCGCGCGCGAGAGCTGTTCTATGCTCTGTGGATCTCAGATCTATTCATGAAGAGGGTTG 175990
Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
|| || | ||| || | ||||| ||||| | || || | | ||| |
Sbjct 175989 AGAACAACGAGGAGTGGAGCCTTATGTGCCCTCACGACAGCCCTGGCTTGGCTGATTGTT 175930
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|||| || || | || ||| |||| | || |||||| || || ||| | || | |
Sbjct 175929 GGGGAGATGAATTTGATGCATTATATCAGAAATATGAACAAGAAGG-TAGGTTTGTTAAA 175871
Query 364103 CAATTCC-CGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161
|| ||| ||| || | |||||| || || || || | || | ||||| |||||
Sbjct 175870 AAAGTCCGCGCTCAAATCCTATGGAAGGCTATTATTGAGGCACAAGTAGAGACTGGAACT 175811
Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221
|| || ||| | ||||||||| | |||||| | ||| ||| || || | | || ||
Sbjct 175810 CCATACATGCTTTACAAAGATGCATGCAACAGAAAGAGCAATCAAAAGAATTTGGGAACC 175751
Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281
|| | ||||| ||||| || |||||| |||| ||||| || | || || ||
Sbjct 175750 ATCAAATGCAGCAATCTATGCACGGAGATTGTTGAGTACACATCTGCTGATGAAGTAGCT 175691
Query 364282 GTATGTAACCTTGCGTCGATCGC 364304
|| || ||| | ||||| || ||
Sbjct 175690 GTTTGCAACTTGGCGTCAATTGC 175668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303323641602908
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |