Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1030 96.9 3e-15
seq197 96.9 3e-15
seq486 84.2 2e-11
>seq1030
Length=27445
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044
||||| ||||| | || || || || | || || || | || ||| | || || |||
Sbjct 2906 AACAATATGCAGATCTTCGTGAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAG 2847
Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104
|| |||||||||||| | |||||| ||||| ||||| || || || || ||
Sbjct 2846 GCTTCCGACACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAGGAGGGTATCCCCCCG 2787
Query 24105 GATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGAT 24164
|| || ||| ||||||| | || || || || || || |||| | | | | | |||
Sbjct 2786 GACCAGCAGCGACTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACCCTGTCCGAC 2727
Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| || || |||||||| |||| || ||||| || | ||||||||
Sbjct 2726 TACAACATCCAGAAGGAATCTACCCTTCACTTGGTGTTGAGGCTTAGAGGAGG 2674
>seq197
Length=620651
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||| | ||||| || | || ||| | |||||||| ||
Sbjct 446704 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACCCTAGAAGTCGAAGCTTCA 446645
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | || || ||||| ||||| |||||||| ||||| || ||
Sbjct 446644 GACACCATCGAGAATGTAAAGGCTAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCAG 446585
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | || || ||||| || ||||| | | | | | | || || |||
Sbjct 446584 CAGCGTCTGATCTTCGCTGGTAAGCAGCTAGAAGACGGCCGCACCTTATCTGACTACAAC 446525
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
|| || || || ||||| ||||| | || ||| || | ||||||||
Sbjct 446524 ATCCAGAAGGAGTCTACCCTTCATCTTGTTTTACGACTCCGAGGAGGA 446477
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||| | ||||| || | || ||| | |||||||| ||
Sbjct 448332 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACCCTGGAAGTCGAAGCTTCA 448273
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | || || ||||| ||||| |||||||| ||||| || ||
Sbjct 448272 GACACCATCGAGAATGTAAAGGCTAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCAG 448213
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | || || ||||| || ||||| | | | | | | || || |||
Sbjct 448212 CAGCGTCTGATCTTCGCTGGTAAGCAGCTAGAAGACGGCCGCACCTTATCTGACTACAAC 448153
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
|| || || || ||||| ||||| | || ||| || | ||||||||
Sbjct 448152 ATCCAGAAGGAGTCTACCCTTCATCTTGTTTTACGACTCCGAGGAGGA 448105
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||| | ||||| || | || || | ||||| || ||
Sbjct 447388 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACTCTGGAAGTTGAAGCTTCA 447329
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | |||||| ||||| |||||||| || || || || || ||
Sbjct 447328 GACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 447269
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| |||| | | |||||||| || ||||| | | | | | | ||| || |||
Sbjct 447268 CAGAGGTTGATCTTTGCAGGCAAGCAGCTTGAAGACGGCCGCACCTTGTCCGACTACAAC 447209
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || ||||||||||| | ||| | || || | || |||||||
Sbjct 447208 ATCCAGAAAGAATCTACCCTCCATCTTGTTTTGCGTCTGCGAGGAGG 447162
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||| ||||||| || | || || | ||||| || ||
Sbjct 446932 ATGCAGATTTTCGTGAAAACCCTAACTGGCAAGACAATCACTCTGGAAGTTGAAGCTTCA 446873
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | || || ||||| ||||| |||||||| |||||||| ||
Sbjct 446872 GACACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGACCAG 446813
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG--AAACGTCAGCGATTATA 24168
||| |||| || | || ||| || ||||| ||||| | | | | |||| || ||||
Sbjct 446812 CAGCGACTTATCTTCGCCGGTAAACAACTAGAAGACGGCCGTACATTGTCA--GACTATA 446755
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
| || || ||||| || || |||| || || ||
Sbjct 446754 ATATCCAGAAAGAGTCGACTCTTCACTTGGTATT 446721
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||| ||||||| || | || || | ||||| || ||
Sbjct 449089 ATGCAGATTTTCGTGAAAACCCTAACTGGCAAGACAATCACTCTGGAAGTGGAAGCTTCA 449030
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | || || ||||| ||||| |||||||| |||||||| ||
Sbjct 449029 GACACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGACCAG 448970
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| |||| || | || ||| || ||||| ||||| | | | | | || |||||
Sbjct 448969 CAGCGACTTATCTTCGCCGGTAAACAACTAGAAGACGGCCGTACATTGTCTGACTATAAT 448910
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|| || ||||| || || |||| || || ||
Sbjct 448909 ATCCAGAAAGAGTCAACCCTTCACTTGGTATT 448878
>seq486
Length=217039
Score = 84.2 bits (92), Expect = 2e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 131864 ACGGTGAATTGAATTGTATTCGCAGCAGGCTTAGTTCTTAAATAATACATGCCCGTCTTC 131923
|| |||||||| |||| ||| ||||||||||||| | |||||||||||| || ||||||
Sbjct 174762 ACAGTGAATTGTATTGCATTTACAGCAGGCTTAGTACGTAAATAATACATTCCAGTCTTC 174821
Query 131924 AAGCCTTTCTCCCAAGAATAATTGTGTATGGACGATAAAATTTTGTAGCTGGGATTGGCC 131983
||||| | | ||| | ||| || || || | || || ||| | || | ||
Sbjct 174822 AAGCCCATTTTCCACGCATAGAAATGAATCGATGTCAATTTTCCATAGTTTGGTTCTGCT 174881
Query 131984 ACAAACAGATTGAGCGATTGACTCTGATCGATGTAAGGTCCCCTGTCTGCGGCCAT 132039
||| | || | ||||||||||| || ||| ||| || | || ||||||||
Sbjct 174882 ACATGGATGTTAAATGATTGACTCTGGTCAATGAAAGCACCACGATCCGCGGCCAT 174937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429926599718070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |