Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_007497.1
Length=44856
Score E
Sequences producing significant alignments: (Bits) Value
seq960 304 4e-78
>seq960
Length=33163
Score = 304 bits (336), Expect = 4e-78
Identities = 722/1082 (67%), Gaps = 12/1082 (1%)
Strand=Plus/Minus
Query 27133 GCGGAGCGGATACGGCCGCCGATGCGCCGCCCCGCCTTG-CGCGGATCGGCAATAGCGAT 27191
|| ||||| | || |||||||| ||||| || ||| | || | || || | |||
Sbjct 13794 GCCGAGCGCAGGCGCCCGCCGATCCGCCGGCCGGCCCGGTCGTTGTCCGCCACGCG-GAT 13736
Query 27192 CACCTGCCCCGGACCGACCAGCACGCCGTCCATGCCGACCTGAAACGACACCGTTCCCGC 27251
|||||||||||||| ||||| ||||||| ||| || ||| ||| || | |
Sbjct 13735 CACCTGCCCCGGACGCACCAGGGTTCCGTCCAGGCCCACAGAAAAACTCACGCTTTCGGT 13676
Query 27252 CTCGTATCGCGACGTGAGCAAAATCCATTGGCCGACGCGATGTGCCTGCGCCTGCGACGT 27311
|| || || |||| ||||| ||||| ||| || ||||| ||||| || ||
Sbjct 13675 TTCCAGGCGGTTGGTCAGCAGCGCCCATTTGCCGATGCGCTGGGCCTGGGCCTGGGAGGT 13616
Query 27312 GCACCCGAACGCAGTAACCTGCGTCTTAATGACGCCGTAGCGCGCGATCCCGTCT---TC 27368
||| ||| || || | || |||| ||||| || || ||||| || || ||
Sbjct 13615 GCAGCCGGTGGCGGTGATCTCGGTCTGCTGCACGCCATAACGGGCGATGCCTTCCGGATC 13556
Query 27369 GTCCGGCACGTATTCAACGGCTTGCTTGTACTGGTTCGCCGGGTCGTTATAGCTGACGAG 27428
||| ||||| | || ||| ||| || |||||||||||| |||| || ||
Sbjct 13555 GTCG---ACGTACTGCACCTTCTGCCGGTAGAAGTCCGCCGGGTCGTTCCAGCTCACCAG 13499
Query 27429 CGCGACCGTGTACCGCGTCTTACGCTCGCTGCCGACATACCGGAACGAGCCATCGATCAC 27488
|| || |||| || ||||| | | ||| | || |||| ||| ||||||||
Sbjct 13498 GGCCACGCTGTAGCGGGTCTTTTTCGCCGAGCCACCGTAGACGAACTTGCCGTCGATCAC 13439
Query 27489 GTTCGCCGCCGTGTACACGTACACCGGATCTGACGGCATGTCCGCCGATGCGACGACAGC 27548
||| || |||| ||||||||| ||| ||||||||| ||| || | || |
Sbjct 13438 GTTGGCGTTGCTGTAGGTGTACACCGGGTCTTCCGGCATGTCGGCCACCGCCATCACCGA 13379
Query 27549 TCCCGGCCCCCAGTAGGCGATGCCGCGGAACACGCTCGCGATGTCCTGCAACACCTTGAA 27608
|| | ||||| ||||| ||||||||||| | | || | |||||||| ||| || |
Sbjct 13378 GCCTGCGCCCCAATAGGCCATGCCGCGGAAGGTGGTGGCCAGGTCCTGCAGCACTTTCAG 13319
Query 27609 CGCGTCGGCCGCCGACTG-GATCACGCAGTTGCAGGCGAATCGCGGCTCGACGCCGCCTT 27667
||| ||||| || || | || | |||||||| || ||||||||| |||||| |
Sbjct 13318 CGCATCGGC-GCGCACCGAGAGATAGAGGTTGCAGGTAAAGCGCGGCTCGGTGCCGCCCT 13260
Query 27668 TTCCGTCCGACACCATCACATCGCAGTAGCGCGCGATTTCGTACAGCCCCCACTTGTCGA 27727
| || || |||||| | |||||||| | |||| ||||||| |||||||||| |
Sbjct 13259 TGCCATCGGACACCGGCTGGTCGCAGTACTGGCCGATGCGGTACAGCTCCCACTTGTCCA 13200
Query 27728 TCATCGATGCATCGACGGTCTTTCCGAGCCCGTAGCGCTCGTTCAACAGCAGGTCGTAGA 27787
| | || | || | ||||| || || |||| || || |||||||||||||
Sbjct 13199 CCTGGGCGGCGTTGAGCAGGTGCCCGAGGCCATAACGCTGGTGCAGCAGCAGGTCGTAGT 13140
Query 27788 AGATCCACGCGGGATTGTTCGTCCATGCCGGTTTGAACGTGCCGTCCCACGTGCCCGAGT 27847
||||||| || || |||| ||||| |||| ||||| |||||||||||| ||| ||
Sbjct 13139 AGATCCAGGCCGGGTTGTCGGTCCAGGCCGACTTGAAGGTGCCGTCCCACACGCCGCTGT 13080
Query 27848 ACGTGCGCGTCTCAGGATCGTAGTTCGACGGCACACGCACGATCAGACCTCGAACGTGGT 27907
| || || || | ||||||||||| ||||| || | |||| | ||| | | | |
Sbjct 13079 AGGTCCGGGTGGCCGGATCGTAGTTGCTTGGCACGCGGATGATCCGCCCTTGCAATTCGA 13020
Query 27908 ACGAGCGCACCGGGACCTGCGAGAACGAGCG-CGCGTCGAACGTCATACCCACGAGCGCA 27966
| ||||| || | | | |||| ||| || |||||| || || | || |||
Sbjct 13019 AGGAGCGGTTGGGAATCGACTGGAAC-TGCGAGGCATCGAACTGCAGGCCGATGATCGCC 12961
Query 27967 GTCATCGGATAGCGCAGCTTGCGGTCGATGATTTCGGTGATCGCCTCGATGTTCACCGTG 28026
| ||| ||||||| |||| |||||| | |||||||| | ||| | | | ||
Sbjct 12960 GAACCCGGGTAGCGCAACTTGGCGTCGATCACGTCGGTGATGGACTCCACGCTGGTGGTA 12901
Query 28027 TCGGCGATCAGCGAGCTGTGCGCATTCGGCGTAATGCGCCGCACGCGCACCAGCCAGCCG 28086
||||||||| | |||| | |||| ||| | |||||||| ||||| |||||||
Sbjct 12900 TCGGCGATCGCCCCGCTGCTGGAGTTCGCCGTCAGCCGCCGCACCCGCACGGTCCAGCCG 12841
Query 28087 GATTTCGCACTCGGCAGCTCGATCCGATGGGAACGCTCGTACAGCGACGTCGTCTTGCCG 28146
| || || ||||| |||| ||| ||||| ||||||||| | ||||||||
Sbjct 12840 GCCTTGGCCGCTGGCAGGTCGACCCGGTGGGAGCGCTCGTACTTGCTGGAGCTCTTGCCG 12781
Query 28147 TCAAAGGCGCCGCGCAGCACTTCCGCGTACGAGCCCCCGTCAACCGACAGGTCAATCGCA 28206
||||| |||||||||| || ||| || ||||| ||||| || || ||
Sbjct 12780 CTGAAGGCCGACTGCAGCACTTCGACGAACGCCCCGCCGTCGGTGGACAGCTCGATGGCG 12721
Query 28207 TA 28208
||
Sbjct 12720 TA 12719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143414544667304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |