Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq960 304 4e-78 >seq960 Length=33163 Score = 304 bits (336), Expect = 4e-78 Identities = 722/1082 (67%), Gaps = 12/1082 (1%) Strand=Plus/Minus Query 27133 GCGGAGCGGATACGGCCGCCGATGCGCCGCCCCGCCTTG-CGCGGATCGGCAATAGCGAT 27191 || ||||| | || |||||||| ||||| || ||| | || | || || | ||| Sbjct 13794 GCCGAGCGCAGGCGCCCGCCGATCCGCCGGCCGGCCCGGTCGTTGTCCGCCACGCG-GAT 13736 Query 27192 CACCTGCCCCGGACCGACCAGCACGCCGTCCATGCCGACCTGAAACGACACCGTTCCCGC 27251 |||||||||||||| ||||| ||||||| ||| || ||| ||| || | | Sbjct 13735 CACCTGCCCCGGACGCACCAGGGTTCCGTCCAGGCCCACAGAAAAACTCACGCTTTCGGT 13676 Query 27252 CTCGTATCGCGACGTGAGCAAAATCCATTGGCCGACGCGATGTGCCTGCGCCTGCGACGT 27311 || || || |||| ||||| ||||| ||| || ||||| ||||| || || Sbjct 13675 TTCCAGGCGGTTGGTCAGCAGCGCCCATTTGCCGATGCGCTGGGCCTGGGCCTGGGAGGT 13616 Query 27312 GCACCCGAACGCAGTAACCTGCGTCTTAATGACGCCGTAGCGCGCGATCCCGTCT---TC 27368 ||| ||| || || | || |||| ||||| || || ||||| || || || Sbjct 13615 GCAGCCGGTGGCGGTGATCTCGGTCTGCTGCACGCCATAACGGGCGATGCCTTCCGGATC 13556 Query 27369 GTCCGGCACGTATTCAACGGCTTGCTTGTACTGGTTCGCCGGGTCGTTATAGCTGACGAG 27428 ||| ||||| | || ||| ||| || |||||||||||| |||| || || Sbjct 13555 GTCG---ACGTACTGCACCTTCTGCCGGTAGAAGTCCGCCGGGTCGTTCCAGCTCACCAG 13499 Query 27429 CGCGACCGTGTACCGCGTCTTACGCTCGCTGCCGACATACCGGAACGAGCCATCGATCAC 27488 || || |||| || ||||| | | ||| | || |||| ||| |||||||| Sbjct 13498 GGCCACGCTGTAGCGGGTCTTTTTCGCCGAGCCACCGTAGACGAACTTGCCGTCGATCAC 13439 Query 27489 GTTCGCCGCCGTGTACACGTACACCGGATCTGACGGCATGTCCGCCGATGCGACGACAGC 27548 ||| || |||| ||||||||| ||| ||||||||| ||| || | || | Sbjct 13438 GTTGGCGTTGCTGTAGGTGTACACCGGGTCTTCCGGCATGTCGGCCACCGCCATCACCGA 13379 Query 27549 TCCCGGCCCCCAGTAGGCGATGCCGCGGAACACGCTCGCGATGTCCTGCAACACCTTGAA 27608 || | ||||| ||||| ||||||||||| | | || | |||||||| ||| || | Sbjct 13378 GCCTGCGCCCCAATAGGCCATGCCGCGGAAGGTGGTGGCCAGGTCCTGCAGCACTTTCAG 13319 Query 27609 CGCGTCGGCCGCCGACTG-GATCACGCAGTTGCAGGCGAATCGCGGCTCGACGCCGCCTT 27667 ||| ||||| || || | || | |||||||| || ||||||||| |||||| | Sbjct 13318 CGCATCGGC-GCGCACCGAGAGATAGAGGTTGCAGGTAAAGCGCGGCTCGGTGCCGCCCT 13260 Query 27668 TTCCGTCCGACACCATCACATCGCAGTAGCGCGCGATTTCGTACAGCCCCCACTTGTCGA 27727 | || || |||||| | |||||||| | |||| ||||||| |||||||||| | Sbjct 13259 TGCCATCGGACACCGGCTGGTCGCAGTACTGGCCGATGCGGTACAGCTCCCACTTGTCCA 13200 Query 27728 TCATCGATGCATCGACGGTCTTTCCGAGCCCGTAGCGCTCGTTCAACAGCAGGTCGTAGA 27787 | | || | || | ||||| || || |||| || || ||||||||||||| Sbjct 13199 CCTGGGCGGCGTTGAGCAGGTGCCCGAGGCCATAACGCTGGTGCAGCAGCAGGTCGTAGT 13140 Query 27788 AGATCCACGCGGGATTGTTCGTCCATGCCGGTTTGAACGTGCCGTCCCACGTGCCCGAGT 27847 ||||||| || || |||| ||||| |||| ||||| |||||||||||| ||| || Sbjct 13139 AGATCCAGGCCGGGTTGTCGGTCCAGGCCGACTTGAAGGTGCCGTCCCACACGCCGCTGT 13080 Query 27848 ACGTGCGCGTCTCAGGATCGTAGTTCGACGGCACACGCACGATCAGACCTCGAACGTGGT 27907 | || || || | ||||||||||| ||||| || | |||| | ||| | | | | Sbjct 13079 AGGTCCGGGTGGCCGGATCGTAGTTGCTTGGCACGCGGATGATCCGCCCTTGCAATTCGA 13020 Query 27908 ACGAGCGCACCGGGACCTGCGAGAACGAGCG-CGCGTCGAACGTCATACCCACGAGCGCA 27966 | ||||| || | | | |||| ||| || |||||| || || | || ||| Sbjct 13019 AGGAGCGGTTGGGAATCGACTGGAAC-TGCGAGGCATCGAACTGCAGGCCGATGATCGCC 12961 Query 27967 GTCATCGGATAGCGCAGCTTGCGGTCGATGATTTCGGTGATCGCCTCGATGTTCACCGTG 28026 | ||| ||||||| |||| |||||| | |||||||| | ||| | | | || Sbjct 12960 GAACCCGGGTAGCGCAACTTGGCGTCGATCACGTCGGTGATGGACTCCACGCTGGTGGTA 12901 Query 28027 TCGGCGATCAGCGAGCTGTGCGCATTCGGCGTAATGCGCCGCACGCGCACCAGCCAGCCG 28086 ||||||||| | |||| | |||| ||| | |||||||| ||||| ||||||| Sbjct 12900 TCGGCGATCGCCCCGCTGCTGGAGTTCGCCGTCAGCCGCCGCACCCGCACGGTCCAGCCG 12841 Query 28087 GATTTCGCACTCGGCAGCTCGATCCGATGGGAACGCTCGTACAGCGACGTCGTCTTGCCG 28146 | || || ||||| |||| ||| ||||| ||||||||| | |||||||| Sbjct 12840 GCCTTGGCCGCTGGCAGGTCGACCCGGTGGGAGCGCTCGTACTTGCTGGAGCTCTTGCCG 12781 Query 28147 TCAAAGGCGCCGCGCAGCACTTCCGCGTACGAGCCCCCGTCAACCGACAGGTCAATCGCA 28206 ||||| |||||||||| || ||| || ||||| ||||| || || || Sbjct 12780 CTGAAGGCCGACTGCAGCACTTCGACGAACGCCCCGCCGTCGGTGGACAGCTCGATGGCG 12721 Query 28207 TA 28208 || Sbjct 12720 TA 12719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143414544667304