Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq22 95.1 2e-14 seq794 91.5 3e-13 seq418 91.5 3e-13 seq186 91.5 3e-13 seq158 91.5 3e-13 seq96 91.5 3e-13 seq91 91.5 3e-13 seq87 91.5 3e-13 seq82 91.5 3e-13 seq76 91.5 3e-13 seq9 91.5 3e-13 seq180 89.7 1e-12 seq148 89.7 1e-12 seq26 89.7 1e-12 >seq22 Length=1795402 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 214573 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 214632 Query 142563 CCCCACATCGGGCAGAA 142579 |||||| | |||| ||| Sbjct 214633 CCCCACGTTGGGCGGAA 214649 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 130202 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 130143 Query 142563 CCCCACATCGGGCAGA 142578 |||||| | |||| || Sbjct 130142 CCCCACGTTGGGCGGA 130127 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 128438 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 128379 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 128378 CCCCACGTTGGGC 128366 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 215417 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 215476 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 215477 CCCCACGTTGGGC 215489 >seq794 Length=61331 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 59439 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 59498 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 59499 CCCCACGTTGGGC 59511 >seq418 Length=281600 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 172428 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 172369 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 172368 CCCCACGTTGGGC 172356 >seq186 Length=640296 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 166793 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 166734 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 166733 CCCCACGTTGGGC 166721 >seq158 Length=725471 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 439300 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 439241 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 439240 CCCCACGTTGGGC 439228 >seq96 Length=1018226 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| Sbjct 290081 TGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGAT 290140 Query 142112 CCCCGCCAGAGACGC 142126 |||| |||| || || Sbjct 290141 CCCCACCAGGGATGC 290155 >seq91 Length=1040205 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 338046 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 338105 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 338106 CCCCACGTTGGGC 338118 >seq87 Length=1054682 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 |||| |||||| |||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 854873 AGAT-GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTT 854931 Query 142559 CGAGCCCCACATCGGGC 142575 |||||||||| | |||| Sbjct 854932 CGAGCCCCACGTTGGGC 854948 >seq82 Length=1081610 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| Sbjct 91450 TGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGAT 91509 Query 142112 CCCCGCCAGAGACGC 142126 |||| |||| || || Sbjct 91510 CCCCACCAGGGATGC 91524 >seq76 Length=1096767 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 172442 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 172383 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 172382 CCCCACGTTGGGC 172370 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 173183 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 173124 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 173123 CCCCACGTTGGGC 173111 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 253536 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 253595 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 253596 CCCCACGTTGGGC 253608 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 255947 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 256006 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 256007 CCCCACGTTGGGC 256019 >seq9 Length=2311385 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1565484 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1565543 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1565544 CCCCACGTTGGGC 1565556 >seq180 Length=655230 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 634847 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 634906 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 634907 CCCACGTTGGGC 634918 >seq148 Length=759304 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 433978 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 433919 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 433918 CCCACGTTGGGC 433907 Score = 87.8 bits (96), Expect = 4e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 142502 TAGC-CCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 |||| |||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 434968 TAGCTCCGGCTAGCTCAGTCGGTAGAGCATAAGACTCTTAATCTCAGGGTCGTGGGTTCG 434909 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 434908 AGCCCCACGTTGGGC 434894 >seq26 Length=1725502 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 || ||| |||||||||| ||| ||||||||||||||||||||||||||| | ||||||| Sbjct 738433 CAAGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 738492 Query 142110 ACCCCCGCCAGAGA 142123 | |||| |||| || Sbjct 738493 ATCCCCACCAGGGA 738506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027813174528754