Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq197 82.4 5e-11 >seq197 Length=620651 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || || | || || | ||||| || ||||| || ||||| ||||| | Sbjct 448105 AATGCAGATTTTCGTGAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTC 448046 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || | ||| || || || || |||||| | || | |||| Sbjct 448045 GGACACCATCGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCA 447986 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| | || ||||| ||||| || |||||||||||| || | |||| ||||| Sbjct 447985 GCAGCGTCTGATCTTCGCTGGTAAGCAACTAGAAGATGGCCGCACCCTATCCGACTACAA 447926 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||| || |||||||| ||||| | ||| | || ||||| Sbjct 447925 CATTCAGAAGGAGTCCACTCTTCACTTGGTACTGCGTCTGCGCGGAGG 447878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358116969825076