Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq356 84.2 5e-13
>seq356
Length=353365
Score = 84.2 bits (92), Expect = 5e-13
Identities = 128/181 (71%), Gaps = 1/181 (1%)
Strand=Plus/Plus
Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426
|| || || ||||| |||||||| || || | || | || | ||| || || ||| |
Sbjct 97917 TGCACCTTCCACAAGTACGGTCCCTCCGGAACGGTGCAGAAGTTCGACGGCCTGTGCGTG 97976
Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486
|| ||| ||| | || ||||||||||||||| | ||||| |||||||||||| | |
Sbjct 97977 CTGCCGCTCAACATCGTGAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTCATCATC 98036
Query 3487 CTAGCCATCATCAGCGGTATCGTTGTTCTGTACCGCATTGCTCTGCTAGCGTCCCCTGCG 3546
|| | ||| | ||||| ||| | ||||||||| | || || | ||| ||| |||
Sbjct 98037 CTGTCGATCCTGAGCGGCATCTCGCTGCTGTACCGCGTGGCGGTGGTGGCGGGCCC-GCG 98095
Query 3547 C 3547
|
Sbjct 98096 C 98096
Score = 84.2 bits (92), Expect = 5e-13
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 3410 ACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCT 3469
|||| | ||||||||||| || |||||||||||||||||||||||| | |||||||
Sbjct 179380 ACGACGCGCTCTGCATCCTGCCCCTCAACGTGGTCAACGAGAAGATCTACGTGTTCCTCT 179321
Query 3470 GGTTCTGGTTC 3480
|||||||||||
Sbjct 179320 GGTTCTGGTTC 179310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12479755119000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |