Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq486 214 3e-50
seq65 140 6e-28
>seq486
Length=217039
Score = 214 bits (236), Expect = 3e-50
Identities = 947/1473 (64%), Gaps = 70/1473 (5%)
Strand=Plus/Plus
Query 244081 CAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCT 244140
|||||| ||| |||||||| || ||||| || || || | | ||||| | |||
Sbjct 175094 CAGGTGATGGTTGACCACCTGGAATTCTCCAGAAAGAACTCTTCTTTGGTAAATGTTTGA 175153
Query 244141 GCTGAGCGGCTCGA-TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCA 244199
||| ||||| | || | || ||||||| || ||||| || ||| || || ||||
Sbjct 175154 AGTGAATGGCTCAAATGAT-TCATTGTTGCCAAGAATCTGTGCAGTGGAGGCGGTGGGCA 175212
Query 244200 TGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATG--CGGAGTCTGAGCTC 244257
|||| | || || |||| ||||| || ||| || || ||| | | || |||| |
Sbjct 175213 TGGGGGCCAGCAACAGAGAGTTCCGCAGGCCATGTTTCGCGATCTTCTGCTTCAGAGCAC 175272
Query 244258 GTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAG 244317
|||||||||||| | | | | ||| || ||| |||||||| ||| | ||||
Sbjct 175273 --TCCAGTCCCACAGGTCTGTG-GGTG-TC---TTT----CCCCACATTTCATATTGCAA 175321
Query 244318 CAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTG---GGC 244374
| || | ||| | || | || | || || || | || || | | |||
Sbjct 175322 TATTCCTTCACTGGCCGGACAACCAGCATACGTTTCATA---AACGCCGAGTTTTTCGGC 175378
Query 244375 CAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCAT 244434
||| | |||||| | || | || | || |||||||| || || || ||||| ||
Sbjct 175379 CAGTTCACAGCTAGCTTCTAAAGCCCCATAATAGATGGTTTCAAATAT----TTGTTGAT 175434
Query 244435 GTCGC----GGGC--CTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGC 244488
|| |||| ||| | | || | || | || ||||| | || | |||||
Sbjct 175435 TGAGCTTCTGGGCTCCTTCACTCTCGTAA--GGAAGGCGCATCAATACAAAAGCATCGGC 175492
Query 244489 CAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGG 244548
||| || || ||||| |||||||| |||| ||| | | |||| || | ||||| ||
Sbjct 175493 CAGACCTTGGACGCCAATGCCGATAGGTCGGTGCCTCATGTTAGACTTTTTCGCTTCTGG 175552
Query 244549 CACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGAC 244608
||||| || | || | ||||| | |||||| ||||| || || || | ||
Sbjct 175553 GACGGGATAGTAATTAACATCGATAATCTTGTTCAGGTTCTCAGTTATGATTTTGGTCAC 175612
Query 244609 GTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAA 244668
| || || ||| || || | || |||| | |||||
Sbjct 175613 TTGTTTTAGTTTCTCAAAATCATATGTTTT---ATTTTCGG------------TTACAAA 175657
Query 244669 CTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCG-AGTTGGTGTACT 244727
| ||||| || | |||| |||||| || || || || || | || || ||||||
Sbjct 175658 CATGTTGACAGCAATTGACGCCAAGTTGCAAACAGCTACTTCATCAGCAGATG-TGTACT 175716
Query 244728 GGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACT 244787
|||||||| ||||| || || ||||| |||||||| |||| | || |||||| ||
Sbjct 175717 CAACAATCTCCGTGCATAGATTGCTGCATTTGATGGTTCCCAAATTCTTTTGATTGCTCT 175776
Query 244788 TGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGA 244847
| |||||| || || ||||| |||||| | || || ||||| | || || | |
Sbjct 175777 TTCTGTTGCATGCATCTTTGTAAAGCATGTATGGAGTTCCAGTCTCTACTTGTGCCTCAA 175836
Query 244848 GGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGT 244907
| ||||| ||| ||| ||| | | | | | || ||| || |
Sbjct 175837 TAATAGCCTTCCATAGGATTTGAGCGCGGACTTTTTTAACAAACCTACCTTCTTGTTCAT 175896
Query 244908 AGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACG 244967
| || | || || || || ||||| || | | ||| |||| | ||
Sbjct 175897 ATTTCTGATATAATGCATCAAATTCATCTCCCCAACAATCAGCCAAGCCAGGGCT-GTCG 175955
Query 244968 CC-GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGG 245026
|||||||| || |||||||| || || || ||||||| |||||| || || | |
Sbjct 175956 TGAGGGCACATAAGGCTCCACTCCTCGTTGTTCTCAACCCTCTTCATGAATAGATCTGAG 176015
Query 245027 ATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTC 245086
||||| || || | ||| || || | | | | || || ||| ||||||||| ||
Sbjct 176016 ATCCACAGAGCATAGAACAGCTCTCGCGCGCGCACTTCCTCTTTGCCCGTGTTCTTCTTC 176075
Query 245087 AGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCG 245146
| || | || || || | ||| ||||||| ||||| | |||||| |||| |||||||
Sbjct 176076 AAGTCTAGGAACTCGAATATGTCAGCGTGCCACGGCTCGAGGTAGACGGCGAAGGCGCCG 176135
Query 245147 GGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTA 245206
|||||||||||||| ||||||||||| | | | |||| | | |||||| |
Sbjct 176136 GGCCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGCAGCATG 176195
Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266
||||| | ||||| ||| |||||| |||||| |||||||| ||| || | ||||
Sbjct 176196 GGCACCAGCCCGTTGGAGACGCCGTTCGTGCCCGCGATGTAGGTGCCTTTCGCTCTGA-- 176253
Query 245267 TTGCTGATGGACATG----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322
||| ||| ||||| |||| ||||| ||| ||||| || | || || |||
Sbjct 176254 -TGC-AATGAACATGAACTCCTATGCCGCCCGCGGATTTGGATATTAATGCACACTGCTT 176311
Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382
| ||||| || || || |||||||| ||||||| || || || || |||||
Sbjct 176312 CAGAGTGTCGTAGATACCTTCGATGCTGTCGTCCTTCATGGCGATGAGGAAACATGAGGA 176371
Query 245383 CAGCTG-GGGCTTGGGGCTGC--ACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439
||||| |||| |||| || ||| |||||| |||||||||||||| || |||||
Sbjct 176372 GAGCTGAGGGCGGGGGGTGGCGGCCGA---GAACAGGGTGGGGCTGGCGTGCGTGAAGTA 176428
Query 245440 GCGGCTC-GAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGAT-C 245497
| ||| ||||| | ||| || || |||||||||| | |||||||||| |
Sbjct 176429 -CTTCTCGGAGAGCAGGTTGTAGGTGGTGATGGCGGCGTCGATGTCGGCGCCGTGGATGC 176487
Query 245498 TGCAGGGCGCACCTCATGAGGGTGTGCTGGGGC 245530
| || | | || ||| || ||||||| |||
Sbjct 176488 CGATGGACAC-CCGCATCAGCATGTGCTGCGGC 176519
>seq65
Length=1244346
Score = 140 bits (154), Expect = 6e-28
Identities = 169/225 (75%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668
|||||||| || | ||||| | ||||| | ||||||||||| ||||||||| | |
Sbjct 631473 CTGTTCAATGCTGTTGAGACCCTTCCCTGTGTAAAGAAGAAGGCTGACTGGGCGATGCAG 631532
Query 42669 TGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727
||||||| || | || |||||| ||||| || || | ||||| || | || || ||
Sbjct 631533 TGGATCGGCAG-CAAGACCGCAACATTCGGTGAAAGAATAGTAGCATTCGCGGCAGTTGA 631591
Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGA 42786
||||||||||||||| ||| ||||| |||||||||||||| || ||| ||| || |
Sbjct 631592 GGGCATCTTCTTCTCTGGCAGTTTCGCATCCATCTTCTGGCTTAAAAAGAGAGGGCTC-A 631650
Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
|||||||||| |||||| || ||| | ||| ||| || ||||
Sbjct 631651 TGCCCGGACTGACCTTCAGCAATGAATTGATCTCCAGAGATGAGG 631695
Score = 118 bits (130), Expect = 2e-21
Identities = 143/194 (74%), Gaps = 3/194 (2%)
Strand=Plus/Plus
Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCT 42888
|||| || || | |||||||||||||| ||||| | ||||| || ||||| |
Sbjct 631989 AGGGCCTCCACACAGACTTTGCCTGCCTGATGTTCAAG---CACCTAGTCCAGAAGCCTT 632045
Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
| |||||||| || | | ||||||||| ||| ||||||| |||||| |||||||||| |
Sbjct 632046 CCAAGGAGCGAGTGCTGACCATCATCAAGGACGCCGTGGTCATCGAGCAGGAGTTCCTGA 632105
Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008
| | | |||||||| || ||||||||||| || ||||||| ||||||||
Sbjct 632106 CAGATGCTCTGCCCGTCAGACTCCTCGGCATGAACTGTGAACTCATGTCTGAGTACATCG 632165
Query 43009 AGTACGTCGCCGAC 43022
||| || ||||||
Sbjct 632166 AGTTTGTGGCCGAC 632179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944318023193440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |