Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009234.1
Length=35741
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 306 8e-79
>seq1001
Length=29257
Score = 306 bits (338), Expect = 8e-79
Identities = 773/1165 (66%), Gaps = 58/1165 (5%)
Strand=Plus/Minus
Query 23358 TCGGTGATGCGCTGGCGCAGCACCAGATTTTCGAGAGGCGGAACCGGCGTGTAGTCATAA 23417
|||||||||||||||||||| ||| ||||| || ||||| || || |||||||| |||
Sbjct 7851 TCGGTGATGCGCTGGCGCAGGGTCAGGTTTTCCAGCGGCGGGACGGGGGTGTAGTCGTAA 7792
Query 23418 TCGATGTACGCCTTGCCGGACGCGAGAATGTCGGCCGTGTTCGGCTCCGGATCGATCCAC 23477
||||| ||| ||| |||| || | || | ||||| | |||||| ||| |||
Sbjct 7791 TCGATATACAGCTTCCCGGCTTTCAGGGTTTCCACGGTGTTTGACTCCGGGTCGTACCA- 7733
Query 23478 GCGCTACC-GCCGATCAGGTAGCCGTTCGCGACCTGCTGCCGAAACCAGCCGTTGATGCT 23536
|| ||| | | | | |||||||| | ||| || || | | ||||| |
Sbjct 7732 GCATGACCCGTCAACGATATAGCCGTTATTTTTCAGCTCGCGGAATTTGGCATTGATACC 7673
Query 23537 TTCCACGATGTCGCGCGCGAGCGA--CGGATTCAGCGGGC-----CGTCGACGACGGGCA 23589
| || |||||||| |||| |||| | ||||| | ||| | ||| |
Sbjct 7672 GGCGACAATGTCGCGGATAAGCGTTGCGGA---AACGGGCTTGTCCATCGCCCACGCG-- 7618
Query 23590 TCTGCGCTTCGGCGATCGAATCGGCGGCCACCTGAGCGGTGCGCGTGTAGTTCTCGAACG 23649
||||| || || |||| ||||| |||||| || ||||| |||||||| || |||
Sbjct 7617 --TGCGCCTCCGCCATCGTGTCGGCCAGCACCTGCGCCGTGCGGGTGTAGTTTTCAAACA 7560
Query 23650 CGAACTTCGGATCGTCCGAGCACGTGCGCTCGCCCCAGAACCGGAAGCCGT---TGCGGT 23706
|||| |||||||||||||| || || | |||||||||| ||||||| |||||
Sbjct 7559 CGAATAAAGGATCGTCCGAGCAGGTACGGTTGCCCCAGAACTTAAAGCCGTCGTTGCGGA 7500
Query 23707 TCACGAGCGTCGTCACTTCGTGCTCGTTCAGGTAGCCCGCATCGGTCGCCGGGTCCTGCA 23766
| | |||| ||||| || || ||||| | || ||||| ||| | |||||||
Sbjct 7499 TTA---GCGTTGTCACCCCGGCCTGATTCAGCAGGTTGGCGTCGGTAGCCTGCTCCTGCA 7443
Query 23767 AATCCCACGACACGTCGGCGCTGATGCCGGACACGCCGTTCACGACGACATTCGAAATCG 23826
||||||| || || |||||||| ||||| ||||| |||||| | || || || | ||
Sbjct 7442 AATCCCATGAGACCGAGGCGCTGACGCCGGTGACGCCATTCACGCCAACGTTAGACAGCG 7383
Query 23827 TCTTGTGCCAGCCGATGTCGTTGTCGATCTTCGCGCGCAAGCCGGCGGCGATCGCCGGCG 23886
| |||||||| ||| | || | |||||| || ||||||| |||| ||| || | ||
Sbjct 7382 TTTTGTGCCATCCGGTCTCCTGGTCGATTTTGGCGCGCAGGCCGAGCGCGCGGGCGGTCG 7323
Query 23887 CCGGGATG--ACGGCCGTCGAGTTCGTCGTGTCGTCCCAGCCGAGCCAGTCCGGCCAGAT 23944
|| ||| | | || ||||| |||| |||||| | || |||| || ||
Sbjct 7322 CC--CATGCAATATCGGTTTCGTTCGCCGTGGTGTCCCATGCCAGAAAGTCAGGGTGAAT 7265
Query 23945 CACCATGATTTCGCGTTGGCCGAACTGCCTGCGGTACGCGGCGGCTTCTTCCTTCGTCTT 24004
||||| | ||||| |||| ||| | | ||||| | ||| || | |||||
Sbjct 7264 GACCATCAGCTCGCGCTGGCTGAAATTCTCACGGTATTTGATGGCGTCGGAAATGGTCTT 7205
Query 24005 GCAGCCGGACGCCGACACATAGGCCATCGCGCGCAGCGACTGCGCGGTCGCCGCGAGCGC 24064
|||||| |||| || ||| | | ||||||||| ||| ||| | ||| |||||
Sbjct 7204 GCAGCCCCACGCGCTTACGTAGCCGAACGCGCGCAGGCTCTGGCAGGTTGACGCAAGCGC 7145
Query 24065 GGCCGCGACCGGCTGCGTATCGAGGCCGGGCGCGGCGAGAATGCGCGGCTTCACGCCGAG 24124
|| ||| || ||||||||| || || ||| || |||||||||||||||| ||||||
Sbjct 7144 GGTCGCCACTTCCTGCGTATCCAGCCCCGGCACGCCGAGAATGCGCGGCTTAACGCCGGT 7085
Query 24125 CGCACCCTGCGCGGCGAGCAGCGCCTTGATGCCCGTGTACTTGCCG--TCCGGC-GTCAC 24181
| | ||| | | |||||| || | || ||||| |||||| | || | |||
Sbjct 7084 GACGGTTTTCGCCGTTAACAGCGCTTTCAGCCCGGTGTATTTGCCGTTTTCGTCGGTC-- 7027
Query 24182 GGTGCCGATGACGTTCGAGGTCGTCTC------------------GTCGGC---GTCCTT 24220
|||||||||| ||| || | || || ||| || ||| |
Sbjct 7026 -GTGCCGATGATGTTGGAAATGGTTTCTTTCTGCGCCGCTTCCGGGTCTGCCGGGTCGTC 6968
Query 24221 G---CCTTCGGCGACGCGCACGACGACGGTCAGCGGCTTCGTCTGCTTGCCGATCGCGTC 24277
| ||||| | |||||||| || || | | ||| || ||| | | |||| || |
Sbjct 6967 GACACCTTCTGGAACGCGCACCACCACAATGACCGGTTTGCACTGGTCGGCGATGGCCTG 6908
Query 24278 GAGCG-TGCGGCGCAGCGTGCCTTTCTTGCCGGCCTTGCCGAGCGCGGCGACGACGTTCG 24336
|| | | || |||||||||||| || ||||| || |||| || | ||| |
Sbjct 6907 CAGGGATTTTGC-CAGCGTGCCTTTTTTACCGGCTTTACCGATAGCCGTTTGCACGCTGT 6849
Query 24337 TCAGCAGCACGGGCGTATTGAGCGGAAACGCGCTCGCGTCAGCGTCGGCCGCCGTGCAGA 24396
| | ||| || ||| || | || || | | |||||||| ||| ||||||||||
Sbjct 6848 TAATCAGTACCGGCTCGTTTAAGGGGAATGTCTTTGCGTCAGCATCGCTGGCCGTGCAGA 6789
Query 24397 CGACGCCGAGCACGGCCGTCGACACTGAGCGAATCGGGCGGCCGCCTTCGTTGATTTCGA 24456
| | ||||| | ||||||||| || | | ||| | ||| ||| ||||| || ||||
Sbjct 6788 CCATGCCGATGATGGCCGTCGAAACGGTGGAAATGGTGCGCGTGCCATCGTTAATCTCGA 6729
Query 24457 TGACGCGTACGCCGTGGTGGTAATC 24481
|||| |||||||| || || ||
Sbjct 6728 TGACCTCGACGCCGTGATGATAGTC 6704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114247166055084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |