Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009235.2
Length=48674
Score E
Sequences producing significant alignments: (Bits) Value
seq960 230 7e-56
>seq960
Length=33163
Score = 230 bits (254), Expect = 7e-56
Identities = 902/1405 (64%), Gaps = 38/1405 (3%)
Strand=Plus/Plus
Query 17274 ATCGTGGGGCTGGTGAATGGCCTGCAGTCGGTCTATCTCGACGGCACGCCGATCCAGAAC 17333
|||||||| ||| ||| ||| || ||||| | ||| ||| ||||| | |||
Sbjct 12410 ATCGTGGGCCTGAAGAACGGCAAGCGCTCGGTGTTCCTCAACGAGACGCCCCTGGCCAAC 12469
Query 17334 GCGGACGGCTCGCTGAATTTC-CAGAACTACACCGTCGACGCGCGAACCGGCACGCAGGA 17392
|| |||||| ||||| ||| | | | || | |||| | || | ||||| |||||
Sbjct 12470 GCCGACGGCAGCCTGAACTTCTCCGGGGT-CAGCCTCGAGACCCGCAACGGCAGCCAGGA 12528
Query 17393 TCAGGACTACATCTCGGGTTTTCCGGCCGTCGAGCGTGAGGCCGGCGTCGGCGTGCCGCT 17452
||| ||||||| |||| |||||||| || ||| ||| || || | ||| ||
Sbjct 12529 CCAGACCTACATCCCGGGCTTTCCGGCGGTGGAGAACGAGTCCCAGGTGGCGGTGGAACT 12588
Query 17453 GACGTCCGACGCGCCGTGGGTGCGCCAAATCCAGAATACGCAACTGACTGCGGTGCGCGT 17512
| |||| || ||| ||| ||| || ||||||| | ||||||||| |
Sbjct 12589 GCGCAGCGACCAACCCTGGACCCGCGCCATCACCAACCTGCAACTGTCGGCGGTGCGCAT 12648
Query 17513 GCGCTTCGGTGTGCCGGCGCTACAGCGTCAGG---ACACGTCGAACGGCAATATCACGGG 17569
||| | | || || ||| | | ||| |||| |||||| | | || ||
Sbjct 12649 CCGCCTGGCGGTCTCG-CGC--CTGGCCCAGACCAACACCAGCAACGGCGACACCAACGG 12705
Query 17570 CTATCGCGTCGACTATGCGATCGACTTGTCGGTCGACGGCGGGTCGTATGCGCAGGTGCT 17629
||| || || || ||||| |||| |||||||||| ||| | | |||||
Sbjct 12706 CTACACGGTGCGTTACGCCATCGAGCTGTCCACCGACGGCGGGGCGTTCGTCGAAGTGCT 12765
Query 17630 GGCCGGT--GCGTTCGACGGCAAGACGACGTCGCTCTATGAGCGCTCGCATCGGATCGAG 17687
| | || || ||| |||||||| | || |||||||| || ||| ||||
Sbjct 12766 G--CAGTCGGCCTTCAGCGGCAAGAGCTCCAGCAAGTACGAGCGCTCCCACCGGGTCGAC 12823
Query 17688 CTGCC-GCGCGCAAAAAATGGTTGGTTGATCCGCGTGCGCCGCATCACGCCGAACGCGCA 17746
||||| ||| || || || ||| | || ||||| || | ||| ||||| |
Sbjct 12824 CTGCCAGCG-GCCAAGGCCGGCTGGACCGTGCGGGTGCGGCGGCTGACGGCGAACTCCAG 12882
Query 17747 CACGGCGACGATCGCCGACGCGATCAACATCGAGGCGATTACCGAGATCATCGATCGGAA 17806
|| | | |||||||||| | | || | | ||| | || ||||| | ||||| ||
Sbjct 12883 CAGCGGGGCGATCGCCGATACCACCAGCGTGGAGTCCATCACCGACGTGATCGACGCCAA 12942
Query 17807 GCTCCGCTATCCGATGACGGCGCTTGTCGGTATGACGTTCGACGCACGTTCGTTC---TC 17863
| | ||||| ||| ||||| | |||| || |||||| || |||| ||
Sbjct 12943 GTTGCGCTACCCGGGTTCGGCGATCATCGGCCTGCAGTTCGATGCCTCGCAGTTCCAGTC 13002
Query 17864 GAGCGTGCCA---GTGCGTTCGTATCACGTGCGAGGGATGATCTTCCGAGTCCCGACAAA 17920
|| | ||| | | |||| || ||| |||| |||| |||| || || | ||
Sbjct 13003 GAT--TCCCAACCGCTCCTTCGAAT----TGCAAGGGCGGATCATCCGCGTGCCAAGCAA 13056
Query 17921 CTACGACCCGGAGACGCGTACGTACTCGGGTACATGGGACGGTACGTTCAAGGCAGCATG 17980
|||||| |||| || || || ||| || |||||||| || |||||| | || ||
Sbjct 13057 CTACGATCCGGCCACCCGGACCTACAGCGGCGTGTGGGACGGCACCTTCAAGTCGGCCTG 13116
Query 17981 GACGAACAATCCGGCGTGGGTCTACTACGGCCTACTTCTCGACAAGCTCAACGGATTGGG 18040
||| |||| ||||| ||| ||||||||| ||| || || || ||| | || | ||
Sbjct 13117 GACCGACAACCCGGCCTGGATCTACTACGACCTGCTGCTGCACCAGCGTTATGGCCTCGG 13176
Query 18041 TGACCGTGTCGATGCTTCGATGGTCGATAAGTGGGCGCTGTACGCAATCGCGCGTTACTG 18100
||| || | || | ||| || ||||||| ||||||| |||| | |||||
Sbjct 13177 GCACCTGCTCAACGCCGCCCAGGTGGACAAGTGGGAGCTGTACCGCATCGGCCAGTACTG 13236
Query 18101 CGACGAACTCGTGTCCGACGGGAAGGGCGGCAAGGAGCCGCGCTTCACCTGCAACTGCGT 18160
|||| | | |||||||| || |||||||||| ||||||||||| ||||||||| |
Sbjct 13237 CGACCAGCCGGTGTCCGATGGCAAGGGCGGCACCGAGCCGCGCTTTACCTGCAACCTCTA 13296
Query 18161 GCTTCAGACGCGCGCGGACGCATTCAAGGTGGTACAGGATCTCGCGAGCGTCTTTCGCGG 18220
|| | |||||| || || | || ||| | ||||| || || | | ||| |||||
Sbjct 13297 TCTCTCGGTGCGCGCCGATGCGCTGAAAGTGCTGCAGGACCTGGCCACCACCTTCCGCGG 13356
Query 18221 CATTTCGTACTGGGGCGCCGGGTCGGTGGTCGCGTCGGCCGATATGCCGTCCGATCCGGT 18280
||| | || |||||||| || |||||| | ||| |||||| |||||| || |||||
Sbjct 13357 CATGGCCTATTGGGGCGCAGGCTCGGTGATGGCGGTGGCCGACATGCCGGAAGACCCGGT 13416
Query 18281 CTACCTGTACACGGCCGCGAATGTCGTCGGTGGTTCATTCAAGTACGTCGG--CAGCGAA 18338
||| |||| ||| || || ||| || ||| |||| || | |||||
Sbjct 13417 GTACACCTACAGCAACGCCAACGTGATCGACGGCAAGTTCGTCTACGGTGGCTCGGCGAA 13476
Query 18339 CGCAAGACGCGTTACACGGTCGCGCTCGTCAGCTACAACGATCCGACGAACCAGTACAAG 18398
||||| || |||| || || || || |||| ||||| ||| || || ||| |
Sbjct 13477 --AAAGACCCGCTACAGCGTGGCCCTGGTGAGCTGGAACGACCCGGCGGACTTCTACCGG 13534
Query 18399 CAAGCTGTCGAGCCCGTGCAGGACGACGACGGGATCGCGCGATATGGCGT-CATCAAGAC 18457
|| || || ||| | || || || ||||| || |||||||| || | ||||
Sbjct 13535 CAGAAGGTGCAGTACGTCGACGATCCGGAAGGCATCGCCCGTTATGGCGTGCAGC-AGAC 13593
Query 18458 GGAGGTCACGGCGTTCGGCTGCACGTCGCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNT 18517
||| |||| || ||||||||| || ||||
Sbjct 13594 CGAGATCACCGCCACCGGCTGCACCTCCCAGGCCCAGGCCCAGCGCATCGGCAAATGGGC 13653
Query 18518 GCTGCTGACGTCGCGGTACGAGACCGGGACGGTGTCGTTTCAGGTCGGGCTCGACGGGAC 18577
||||||||| || || |||| | ||| ||| || || || ||||| ||
Sbjct 13654 GCTGCTGACCAACCGCCTGGAAACCGAAAGCGTGAGTTTTTCTGTGGGCCTGGACGGAAC 13713
Query 18578 GCTTTGTGCG-CCGGGACAGGTGATCGCCGTTGCCGACCCAAAGA--AGGCCGGCCGCCG 18634
| | ||||| ||||| ||||||||| ||| || || ||| || ||||||||| ||
Sbjct 13714 -CCTGGTGCGTCCGGGGCAGGTGATCCGCGTGGCGGA--CAACGACCGGGCCGGCCGGCG 13770
Query 18635 GATCGGCGGGCGCATCCGCGCAGCG 18659
||||||||||||| | ||| | |||
Sbjct 13771 GATCGGCGGGCGCCTGCGCTCGGCG 13795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155631884386608
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