Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009236.1
Length=36690
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 315 2e-81
>seq1001
Length=29257
Score = 315 bits (348), Expect = 2e-81
Identities = 775/1165 (67%), Gaps = 58/1165 (5%)
Strand=Plus/Minus
Query 24362 TCGGTGATGCGCTGGCGCAGCACCAGATTTTCGAGAGGCGGAACCGGCGTGTAGTCGTAA 24421
|||||||||||||||||||| ||| ||||| || ||||| || || ||||||||||||
Sbjct 7851 TCGGTGATGCGCTGGCGCAGGGTCAGGTTTTCCAGCGGCGGGACGGGGGTGTAGTCGTAA 7792
Query 24422 TCGATGTACGCCTTGCCGGACGCGAGAATGTCGGCCGTGTTCGGCTCCGGATCGATCCAC 24481
||||| ||| ||| |||| || | || | ||||| | |||||| ||| |||
Sbjct 7791 TCGATATACAGCTTCCCGGCTTTCAGGGTTTCCACGGTGTTTGACTCCGGGTCGTACCA- 7733
Query 24482 GCGCTACC-GCCGATCAGGTAGCCGTTCGCGACCTGCTGCCGAAACCAGCCGTTGATGCT 24540
|| ||| | | | | |||||||| | ||| || || | | ||||| |
Sbjct 7732 GCATGACCCGTCAACGATATAGCCGTTATTTTTCAGCTCGCGGAATTTGGCATTGATACC 7673
Query 24541 TTCCACGATGTCGCGCGCGAGCGA--CGGATTCAGCGGGC-----CGTCGACGACGGGCA 24593
| || |||||||| |||| |||| | ||||| | ||| | ||| |
Sbjct 7672 GGCGACAATGTCGCGGATAAGCGTTGCGGA---AACGGGCTTGTCCATCGCCCACGCG-- 7618
Query 24594 TCTGCGCTTCGGCGATCGAATCGCCGGCCACCTGAGCGGTGCGCGTGTAGTTCTCGAACG 24653
||||| || || |||| ||| | |||||| || ||||| |||||||| || |||
Sbjct 7617 --TGCGCCTCCGCCATCGTGTCGGCCAGCACCTGCGCCGTGCGGGTGTAGTTTTCAAACA 7560
Query 24654 CGAACTTCGGATCGTCCGAGCACGTGCGCTCGCCCCAGAACCGGAAGCCGT---TGCGGT 24710
|||| |||||||||||||| || || | |||||||||| ||||||| |||||
Sbjct 7559 CGAATAAAGGATCGTCCGAGCAGGTACGGTTGCCCCAGAACTTAAAGCCGTCGTTGCGGA 7500
Query 24711 TCACGAGCGTCGTCACTTCGTGCTCGTTCAGGTAGCCCGCATCGGTCGCCGGGTCCTGCA 24770
| | |||| ||||| || || ||||| | || ||||| ||| | |||||||
Sbjct 7499 TTA---GCGTTGTCACCCCGGCCTGATTCAGCAGGTTGGCGTCGGTAGCCTGCTCCTGCA 7443
Query 24771 AATCCCACGACACGTCGGCGCTGATGCCGGACACGCCGTTCACGACGACATTCGAAATCG 24830
||||||| || || |||||||| ||||| ||||| |||||| | || || || | ||
Sbjct 7442 AATCCCATGAGACCGAGGCGCTGACGCCGGTGACGCCATTCACGCCAACGTTAGACAGCG 7383
Query 24831 TCTTGTGCCAGCCGATGTCGTTGTCGATCTTCGCGCGCAAGCCGGCGGCGATCGCCGGCG 24890
| |||||||| ||| | || | |||||| || ||||||| |||| ||| || | ||
Sbjct 7382 TTTTGTGCCATCCGGTCTCCTGGTCGATTTTGGCGCGCAGGCCGAGCGCGCGGGCGGTCG 7323
Query 24891 CCGGGATG--ACAGCCGTCGAGTTCGTCGTGTCGTCCCAGCCGAGCCAGTCCGGCCAGAT 24948
|| ||| | | | || ||||| |||| |||||| | || |||| || ||
Sbjct 7322 CC--CATGCAATATCGGTTTCGTTCGCCGTGGTGTCCCATGCCAGAAAGTCAGGGTGAAT 7265
Query 24949 CACCATGATTTCGCGTTGGCCGAACTGCTTGCGGTACGCGGCGGCTTCTTCCTTCGTTTT 25008
||||| | ||||| |||| ||| | || ||||| | ||| || | || ||
Sbjct 7264 GACCATCAGCTCGCGCTGGCTGAAATTCTCACGGTATTTGATGGCGTCGGAAATGGTCTT 7205
Query 25009 GCAGCCGGACGCCGACACATAGGCCATCGCGCGCAGCGACTGCGCGGTCGCCGCGAGCGC 25068
|||||| |||| || ||| | | ||||||||| ||| ||| | ||| |||||
Sbjct 7204 GCAGCCCCACGCGCTTACGTAGCCGAACGCGCGCAGGCTCTGGCAGGTTGACGCAAGCGC 7145
Query 25069 GGCCGCCACCGGCTGCGTATCGAGGCCGGGCGCCGCGAGAATGCGCGGCTTCACGCCGAG 25128
|| |||||| ||||||||| || || ||| | |||||||||||||||| ||||||
Sbjct 7144 GGTCGCCACTTCCTGCGTATCCAGCCCCGGCACGCCGAGAATGCGCGGCTTAACGCCGGT 7085
Query 25129 CGCACCCTGCGCGGCGAGCAGCGCCTTGATGCCCGTGTACTTGCCG--TCCGGC-GTCAC 25185
| | ||| | | |||||| || | || ||||| |||||| | || | |||
Sbjct 7084 GACGGTTTTCGCCGTTAACAGCGCTTTCAGCCCGGTGTATTTGCCGTTTTCGTCGGTC-- 7027
Query 25186 GGTGCCGATGACGTTCGAGGTCGTCTC------------------GTCGGC---GTCCTT 25224
|||||||||| ||| || | || || ||| || ||| |
Sbjct 7026 -GTGCCGATGATGTTGGAAATGGTTTCTTTCTGCGCCGCTTCCGGGTCTGCCGGGTCGTC 6968
Query 25225 G---CCTTCGGCGACGCGCACGACGACGGTCAGCGGCTTCGTCTGCTTGCCGATCGCGTC 25281
| ||||| | |||||||| || || | | ||| || ||| | | |||| || |
Sbjct 6967 GACACCTTCTGGAACGCGCACCACCACAATGACCGGTTTGCACTGGTCGGCGATGGCCTG 6908
Query 25282 GAGCG-TGCGGCGCAGCGTGCCTTTCTTGCCGGCCTTGCCGAGCGCCGCGACGACGTTCG 25340
|| | | || |||||||||||| || ||||| || |||| |||| ||| |
Sbjct 6907 CAGGGATTTTGC-CAGCGTGCCTTTTTTACCGGCTTTACCGATAGCCGTTTGCACGCTGT 6849
Query 25341 TCAGCAGCACGGGCGTATTGAGCGGAAACGCGCTCGCGTCAGCGTCGGCCGCCGTGCAGA 25400
| | ||| || ||| || | || || | | |||||||| ||| ||||||||||
Sbjct 6848 TAATCAGTACCGGCTCGTTTAAGGGGAATGTCTTTGCGTCAGCATCGCTGGCCGTGCAGA 6789
Query 25401 CGACGCCGAGCACGGCCGTCGACACTGAGCGAATCGGGCGGCCGCCTTCGTTGATTTCGA 25460
| | ||||| | ||||||||| || | | ||| | ||| ||| ||||| || ||||
Sbjct 6788 CCATGCCGATGATGGCCGTCGAAACGGTGGAAATGGTGCGCGTGCCATCGTTAATCTCGA 6729
Query 25461 TGACGCGTACGCCGTGGTGGTAATC 25485
|||| |||||||| || || ||
Sbjct 6728 TGACCTCGACGCCGTGATGATAGTC 6704
Score = 87.8 bits (96), Expect = 4e-13
Identities = 162/234 (69%), Gaps = 8/234 (3%)
Strand=Plus/Minus
Query 29808 GCGTAGGCGAGCAGCAGGCCGCGCGCCTTGTCGTTGATGAGCTGCCGCAGCAGGACTTCG 29867
|||||||| |||| | | ||||| ||||||| | |||| ||| | |||||
Sbjct 2965 GCGTAGGCCAGCATGACCGCACGCGCGGCCTCGTTGACGCGCTGTCGCCAGATAACTTCC 2906
Query 29868 CGATAGGCGTTTTCCTGAAGGACGCGCGTCAC---GGGCTCGGATTCGAGCGCGAGCGT- 29923
|| |||||||||||||| || | || |||| |||||||| || |||| |||||
Sbjct 2905 CGGTAGGCGTTTTCCTGCAGCA---GCTTCACCAGCGGCTCGGACTCAAGCGACAGCGTG 2849
Query 29924 CGCGGCGATTTCCGCCTGGTGCTCGGGCGGATACAGCGACACGAGGCGCGCCTTGCGCTC 29983
||| |||||| | |||| || || ||| || ||||| ||||| |||||| || ||
Sbjct 2848 CGC-GCGATTGCGTCCTGCTGGTCTTCCGGGTATAGCGAGACGAGTGTCGCCTTTCGTTC 2790
Query 29984 GGCGAACAGCGTCTCGAAGTCGAGCGGGTCGACGATGTCCGGCGCGGGGAGCTG 30037
| | | || || |||| || || |||| ||| ||||||| ||||||
Sbjct 2789 GCTCAGGATGGTTTCATAGTCCAGTTCTTCCACGACGTCAGGCGCGGCGAGCTG 2736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117283901359856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |