Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009382.1
Length=38760
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 324 3e-84
>seq1001
Length=29257
Score = 324 bits (358), Expect = 3e-84
Identities = 673/994 (68%), Gaps = 40/994 (4%)
Strand=Plus/Plus
Query 19039 ATCGGCAAGGCCGGCGACAAAGGCACGCTCGCCCACACGCTCGACGCCATCACCGACCAG 19098
||||| || ||||| | ||||||||||| || | | || | |||||| ||||||||
Sbjct 6866 ATCGGTAAAGCCGGTAAAAAAGGCACGCTGGCAAAATCCCTGCAGGCCATCGCCGACCAG 6925
Query 19099 ACCAACCCGCTCACGGTCGTGGTGCGCGTCGCCGGCGGTGCTTCCGA------------- 19145
||| ||| ||| || ||||||||||| | | |||| |||
Sbjct 6926 TGCAAACCGGTCATTGTGGTGGTGCGCGTTCCAGAAGGTGTCGACGACCCGGCAGACCCG 6985
Query 19146 -----GGCCGAGA------CCACGTCCAACCTGATCGGCACCACCAACGCGGCCGGCCGG 19194
||| ||| ||| |||||| | |||||||| ||| ||| ||||
Sbjct 6986 GAAGCGGCGCAGAAAGAAACCATTTCCAACATCATCGGCACGACCGACGAAAACGGCAAA 7045
Query 19195 TACACCGGCATGAAGGCGCTGCTGACCGCCCGCAACCGTTTT-GGCGTCGCGCCGCGCAT 19253
|||||||| |||| |||||| | || || |||||| ||||| |||||||||
Sbjct 7046 TACACCGGGCTGAAAGCGCTGTTAACGGCGAA-AACCGTCACCGGCGTTAAGCCGCGCAT 7104
Query 19254 CCTGGCTGTGCCGGGGCTCGACAGCCTGCCAGTCGGGACCGAGCTGG--TCACCATCGCG 19311
|| | ||||||||||| || | | | ||| | ||||| ||| | ||| | | ||
Sbjct 7105 TCTCGGCGTGCCGGGGCTGGATACGCAGGAAGTGGCGACCGCGCTTGCGTCAACCT-GC- 7162
Query 19312 CAGAAGCTGCGCGCCTTCGCCTACCTGTCGGCGTACGGCTGCCAAACCAAGGAAGAGGCC 19371
|||| |||||||| |||| |||| | |||| |||||| | |||| || |||
Sbjct 7163 CAGAGCCTGCGCGCGTTCGGCTACGTAAGCGCGTGGGGCTGCAAGACCATTTCCGACGCC 7222
Query 19372 GTCGCCTACCGCAGCAACTTCGGCCAGCGCGAAGCGATGGTGATGTGGCCGGATTTCGTC 19431
|| ||||| || ||| |||||||||| |||||| || || || || |
Sbjct 7223 ATCAAATACCGTGAGAATTTCAGCCAGCGCGAGCTGATGGTCATTCACCCTGACTTTCTG 7282
Query 19432 GGCTGGGATACCGCCGCCAATGCCGAGACC-ACCCTG--TGGGCCACGGCCCGCGCGGTC 19488
| ||||| ||| | || || ||| ||| | || ||||| || ||||||||| ||
Sbjct 7283 GCATGGGACACCACGGCGAA---CGAAACCGATATTGCATGGGCGACCGCCCGCGCGCTC 7339
Query 19489 GGCTTGCGCGCCAAGATCGACAACGACACCGGCTGGCACAAGACGCTTTCCAACGTGGCG 19548
||| |||||||||| |||||| | || ||||| |||||||| ||||| || ||||| |
Sbjct 7340 GGCCTGCGCGCCAAAATCGACCAGGAGACCGGATGGCACAAAACGCTGTCTAACGTTGGC 7399
Query 19549 GTGGGCGGCGTGACCGGTCTGTC-GCGCGACGTGTTC-TGGGACCTTCAGGACCCGGCGA 19606
||| ||||| ||||| ||| |||| || || ||||| | ||||| | ||| |
Sbjct 7400 GTGAATGGCGTCACCGGC--GTCAGCGCCTCGGTCTCATGGGATTTGCAGGAGCAGGCTA 7457
Query 19607 CCGACGCGGGCTACCTGAACGCCAACGAGGTGACCACGCTGGTTCACCGCGACGGCTACC 19666
||||||| | ||||| || |||||| ||||| | | | ||||||||
Sbjct 7458 CCGACGCCAACCTGCTGAATCAGGCCGGGGTGACAACGCTAATCCGCAACGACGGCTTTA 7517
Query 19667 GCTTCTGGGGCTCGCGCACGTGCAGTGCGGATCCGCTGTTCGCCTTCGAGAACTACACCC 19726
||||||||| || || ||| | ||||| | |||| || || ||||||||||
Sbjct 7518 AGTTCTGGGGCAACCGTACCTGCTCGGACGATCCTTTATTCGTGTTTGAAAACTACACCC 7577
Query 19727 GCACCGCGCAGGTGCTGGCCGACACCATGGCGGAAGCACACATGTGGGCGAACGACCTAC 19786
|||| |||||||||||||||||||| |||||||| || ||| |||||||| ||| |
Sbjct 7578 GCACGGCGCAGGTGCTGGCCGACACGATGGCGGAGGCGCACGCGTGGGCGATGGACAAGC 7637
Query 19787 CGATGACGCCCACCCTCGTGCGCGATCTGCTGGAGGGCATCAATGCCAAGTTGCGCATGC 19846
| | | | || || | ||||| | | | || ||||||||||| || ||| ||
Sbjct 7638 CCGTTTCCGCAACGCTTATCCGCGACATTGTCGCCGGTATCAATGCCAAATTCCGCGAGC 7697
Query 19847 TGACCCGCAACGGATACCTGCTGGGCGGCGCCGCGTGGTTCGACGCGGACGCCAACAGCA 19906
||| ||||| || | | | ||| | |||| |||| |||| | |||| |
Sbjct 7698 TGAAAAATAACGGCTATATCGTTGACGGGTCATGCTGGTACGACCCGGAGTCAAACACCG 7757
Query 19907 AGGACACGCTGAAGGCCGGGCAACTCGCCATCGACTACGACTACACGCCCGTCCCACCTC 19966
||| || ||||| |||||| | || ||||| ||||||||||| |||||||| || |
Sbjct 7758 TGGAAACCCTGAAAGCCGGGAAGCTGTATATCGATTACGACTACACCCCCGTCCCGCCGC 7817
Query 19967 TGGAGAACCTCACGTTCCGCCAGCGCATCACCGA 20000
|||| ||||| || | |||||||||||||||||
Sbjct 7818 TGGAAAACCTGACCCTGCGCCAGCGCATCACCGA 7851
Score = 297 bits (328), Expect = 5e-76
Identities = 886/1345 (66%), Gaps = 38/1345 (3%)
Strand=Plus/Plus
Query 14361 ATGGCCATCATCGACCTGTCGCAGCTGCCGGCGCCGGCCGTGGTCGAAACGCTCGACTAC 14420
||||| || | ||||| ||||| | ||||| | ||| || ||| || |||||
Sbjct 2715 ATGGCAATTGTTGACCTTAACCAGCTCGCCGCGCCTGACGTCGTGGAAGAACTGGACTAT 2774
Query 14421 GAAGCCATCCTGGCCGAGCGGAAAGACTACTTT-GTGTCGCTGCACCCCGCCGACCAGCG 14479
||| |||||||| ||| || |||| | || | || ||||| |||| | |||||||
Sbjct 2775 GAAACCATCCTGAGCGAACG-AAAGGCGACACTCGTCTCGCTATACCCGGAAGACCAGCA 2833
Query 14480 GGACGCCG-CGCGCGCCACGCTGGCGCTGGAATCCGAGCCGATCACCAAGCTCTTGCAGG 14538
|||||| ||||||| |||||| |||| || ||||||||| | ||||| ||||||
Sbjct 2834 GGACGCAATCGCGCGC-ACGCTGTCGCTTGAGTCCGAGCCGCTGGTGAAGCTGCTGCAGG 2892
Query 14539 AGAACGCCTACCGCGAGCTGGTGTGGCGCCAGCGCGTGAACGACGCGGCGCGTGGGGTCA 14598
| ||||||||||| || | | ||||| |||||||| ||||| || ||||||| |||||
Sbjct 2893 AAAACGCCTACCGGGAAGTTATCTGGCGACAGCGCGTCAACGAGGCCGCGCGTGCGGTCA 2952
Query 14599 TGCTGGCCTTCGCCGAAGGGGAAGACCTGGAGCAGATTGCGGCGAACTTCAACGTGCAGC 14658
||||||||| ||| | ||| ||||| || ||||| | | || | |||||| |||
Sbjct 2953 TGCTGGCCTACGCTGCAGGAAGCGACCTTGACCAGATAGGCGGAAATTACAACGTTGAGC 3012
Query 14659 GTCTGACCATCACGCCGGCTGACACCACCACCGTGCCGCCGACGCCCGCCGTGATGGAGG 14718
| || ||||| || || ||| ||| || | ||||||||||| ||||||||||||
Sbjct 3013 GCCTTGTTATCACCCCTGCAGACGACACGACGTTACCGCCGACGCCTGCCGTGATGGAGT 3072
Query 14719 GCGACGACTCGCTGCGCGAGCGCGCA--CAGGAAGCGTTTGAAGGGCTGTCCGTGGCCGG 14776
||| || || | || ||||| ||| | || ||||| |||||| || ||
Sbjct 3073 CGGAC-ACCGACTAC-CGTCTGCGCATTCAGCAGGCCTTTGAGGGGCTGAGTACCGCAGG 3130
Query 14777 CCCGACCAAGGCCTACGAGCAGTT---CGCGCGCTCGGCTGACGGCCGGGTGGCGGACGC 14833
| | ||| | || | | ||||| || ||| |||||||| ||||| || ||
Sbjct 3131 CTCTACC---GGCTCCTATCAGTTTCACGGTCGCAGCGCTGACGGGCGGGTCGCCGATAT 3187
Query 14834 GCGCGCGATCAG-CCCG-GCCGGCGCGGAGGTGGTGGTCTCGGTGCTGTCGCACCTGAAC 14891
| ||||| |||| || ||| | ||| || ||||||| || | | ||
Sbjct 3188 TTCGGTCATCAGTCCCGAACCTGCGTG--CGTGACCGTTACGGTGCTTTCCCGCGAAAAT 3245
Query 14892 GACGGC---GCGGCCGACGAGAGCCTGCTGGCGGCTGTACGCACCGCGTTGAGCGATGAC 14948
||||| ||| | |||||| ||||| || |||| |||| ||| ||||||
Sbjct 3246 AACGGCGTGGCGTCTGACGAG---CTGCTCAACATCGTGCGCAACGCGCTGAACGATGAA 3302
Query 14949 GATACCCGGCCGCTCGGCGACCGCCTGACGGTGCAATCCGCCACCATCGTCCCATACCGC 15008
|| | ||||| ||| |||||| |||| |||| || || | ||| || ||
Sbjct 3303 GACGTCAGGCCGGTCGCTGACCGCGTGACCCTGCAGTCGGCGAACATTATCGACTATAAA 3362
Query 15009 ATCCGTGCCACGCTGTACCTGGCATCGGGGCCGGCGGCCGAGCCGATCCTGGACGCGGC- 15067
||| || |||| ||||| | || || | |||||| | || || ||
Sbjct 3363 ATCACCGCGTCGCTTTACCTTTACCCCGGTCCCGAAAGCGAGCCTGTGCTCAGTGCTGCG 3422
Query 15068 -TGGCAAGCGGGCCGACGTCTACCGCACCACGCGGCGGCGCATCGGTCGCGACATCAACC 15126
|||| || | ||| || |||| ||| || || |||| ||||| ||| |
Sbjct 3423 AAAGCAAAGCTGCAGGCGTATA--TCACCGCGCAGCACCGGCTCGGGCGCGATATCCGCA 3480
Query 15127 GCTCGGCGATCACGGCGGCGCTGCATGTGGAGGGCGTGGAAAAGCTGGTGCTGCACGAAC 15186
||||| || || ||||| ||||| ||||||||| | | | |||| |||||
Sbjct 3481 AATCGGCCATTTATGCCGCGCTCCATGTTGAGGGCGTGCAGCGCGTCGAGCTGGCCGAAC 3540
Query 15187 CGGCCGAAGACATCGCGCTCGATCTGACGCAGGCGGGCTACTGCACCGGCGTGGATATCG 15246
||| | ||||||| |||||| || || ||| | |||| || | | ||
Sbjct 3541 CGGTGGCCGACATCGTTCTCGATGACACACAAGCGTCATGGTGCAGCGACTACGCCGTCA 3600
Query 15247 TCAACGGGGGCACCAGTGAGTAGCGCAACCCTGTTGCCGCCGAACGCGACGCCGCTGGAG 15306
|| ||||||| | ||| | | |||| ||||| | | || | ||||| |||
Sbjct 3601 CCATAGGGGGCAACGATGAATGATACCCGCCTGCTGCCGGTGGGCTCGTCACCGCTTGAG 3660
Query 15307 CGTCGC-GCCGCGCAGACGGGCGCACGCATCGAACGCGTGCCGGTGCCGCTGCGCGACCT 15365
|| || || |||| | |||| || ||| || || |||||||| ||
Sbjct 3661 -GTGGCGGCGGCGCGCGCCTGCGCTGAGATTGAAAATACCCCCGTTCCGCTGCGTCGTCT 3719
Query 15366 GTGGAACCCAGCCACCTGTCCGGCCGAGCTGTTGCCCTTCCTGGCCTGGTCGTTTTCCGT 15425
|||| || | | ||| ||||| | ||| |||| | ||||| ||| ||||||||||
Sbjct 3720 CTGGAGTCCTGACGACTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGGCGTTTTCCGT 3779
Query 15426 GGACCGCTGGAACCCGGCCTGGCCGCTCGCCACCAAGCGCGCCGTGACGGCCGCCTCCTA 15485
||||||||| || | ||||||| ||||| ||||| | |||| ||| | |
Sbjct 3780 TGACCGCTGGGACGAGAACTGGCCGGAGGCCACAAAGCGGGATGTGATCCGCGCGGCGTG 3839
Query 15486 CTTCGTGCA-CCGCAAGAAGGGCACGATCGGCGCGCTTCGCCGCGCGGTGGAGCCGCTGG 15544
|| | || ||| | || || ||||| || || | ||||||| ||||||||| || |
Sbjct 3840 GTTTATCCATGCGC-ACAAAGGAACGATTGGGGCAGTGCGCCGCGTGGTGGAGCCCCTCG 3898
Query 15545 GCTTCCTGATTCGCGTCATCGAGTGGTGGCAGACCAACCCGCCCGGGCCGCGCGGGTCGT 15604
||| ||||||| ||| ||||||||| | ||||| || || | ||| |||
Sbjct 3899 GCTACCTGATTAACGTGTCGGAGTGGTGGGAAACCAA------CGACCCACCCGGCACGT 3952
Query 15605 TCGGGCTCGATGTGGGCGTGCTGCAAACCGGCATCGACGAGGCCATGTACGCCGAGCTGG 15664
| | |||||| | || ||| | | ||||||||| ||||| ||||| |||| |||
Sbjct 3953 TTCGCCTCGATATCGGTGTGTTAGAGACCGGCATCACCGAGGAAATGTATTACGAGATGG 4012
Query 15665 AACGCCTCATTGACGACGCCAAGCC 15689
| || ||||||| ||| || |||||
Sbjct 4013 AGCGGCTCATTGCCGATGCAAAGCC 4037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123907760243816
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