Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009514.1
Length=47021
Score E
Sequences producing significant alignments: (Bits) Value
seq997 266 1e-66
seq960 93.3 1e-14
>seq997
Length=29618
Score = 266 bits (294), Expect = 1e-66
Identities = 368/510 (72%), Gaps = 14/510 (3%)
Strand=Plus/Minus
Query 45793 AAAGGCGCATGTGACCAGCTACGTCGCTGGACATACGCTGGCGGTAAGCAATGGAAAGGC 45852
||||||||||| || | ||| || |||||||| | ||||| || || || ||||||||
Sbjct 18364 AAAGGCGCATGCGATCTGCTGCGGCGCTGGACTCATGCTGGAGGCAAACAGTGGAAAGG- 18306
Query 45853 CTGA-TGACTCGTCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAACAATGAGCAGA 45911
||| | || || || |||| |||||| ||| |||| |||||| || ||||||| ||
Sbjct 18305 GTGAGTAACGCGCCGGGAGAATGAGCGCGAATTCTGCATGTGGGACCATAAATGAGCTGA 18246
Query 45912 GTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCGTGGGCGGTC 45971
|||||||||| |||| |||| | ||||||||| | | |||| || | |||||| |
Sbjct 18245 TTAACCGCGATCATCTGCGCTGTCGTTATCTGCCTGCTGGTCTTTATGGCTTGGGCGATT 18186
Query 45972 AATCATTACCGTGATAACGCCATCGCCTACAAAGAACAGCGTGATAAAAAAGTCAGTGAG 46031
|| || || || || ||||||||| |||||||||| ||||| ||| |||| || ||||
Sbjct 18185 AACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGAT---AAAGCCACTGAG 18129
Query 46032 ---CTGAAGCAGGCGACCGCCACCATCGCTGACATGCAGCAGCGTCAGCGTGATGTTGCT 46088
|| | ||||| | |||||||||| ||||||||| || |||||||||| |||
Sbjct 18128 AAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGATGCCGCT 18069
Query 46089 GCGATCGATGCAAAATACACGAAGGAGTTAGCCGATGCGAAAACTGAAAATGAAACTCTG 46148
||| | ||||| |||||||| || || ||||||||| | | ||| ||||
Sbjct 18068 GCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAGCGTCTG 18009
Query 46149 CGCGCTGATGTTGCCGCTGGTCGTAAGCGCCTGCGGGTCAATGCCAGTTGCTCCGCAGCC 46208
| ||||| ||||| |||||||| |||| | |||| || | || || ||
Sbjct 18008 CATAGCGATGTCATTGCTGGCCGTAAGCGGCTGCAGCTCAACGCAAACTG-TC-----CC 17955
Query 46209 GTGCGTGAAGCCACCGGACCCACCAGCATGGATAATGCAACCAGCCCCCGACTGGCAGAC 46268
| | | ||| ||||| || | |||||| |||| || ||||| |||| | |||
Sbjct 17954 GCGAACGGAGCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGAC 17895
Query 46269 ACCGCTGAACGGGATTATTTCACCCTCAGA 46298
||||||||||||||||||||| |||||||
Sbjct 17894 TCCGCTGAACGGGATTATTTCATCCTCAGA 17865
>seq960
Length=33163
Score = 93.3 bits (102), Expect = 1e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 15909 TACAGCGGTATCTGGGACGGAACGTTAAAACCGGCATACAGCAACAACATGGCCTGGTGT 15968
|||||||| | |||||||| || || || |||| | | | ||||| ||||||| |
Sbjct 13079 TACAGCGGCGTGTGGGACGGCACCTTCAAGTCGGCCTGGACCGACAACCCGGCCTGGA-T 13137
Query 15969 CTG-TGGGATATGCTTACCCATCCGCGCTACGGCATGGGGAAACGTCTTGGTGCGGCGGA 16027
|| | || |||| || | ||| || ||| | ||| | | || || || |
Sbjct 13138 CTACTACGACCTGCTGCTGCACCAGCGTTATGGCCTCGGGCACCTGCTCAACGCCGCCCA 13197
Query 16028 TGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGACCAGTCAGTGCCGGACGG 16087
||||| || |||| |||||| |||||||||||||||||||||| | ||| | || ||
Sbjct 13198 GGTGGACAAGTGGGAGCTGTACCGCATCGGCCAGTACTGCGACCAGCCGGTGTCCGATGG 13257
Query 16088 CTTTGGCGGCACGGAGCCGCGCATCACCTGTAA 16120
| |||||||| ||||||||| | ||||| ||
Sbjct 13258 CAAGGGCGGCACCGAGCCGCGCTTTACCTGCAA 13290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150342397074924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |