Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_009540.1 Length=49902 Score E Sequences producing significant alignments: (Bits) Value seq997 114 4e-21 >seq997 Length=29618 Score = 114 bits (126), Expect = 4e-21 Identities = 219/323 (68%), Gaps = 0/323 (0%) Strand=Plus/Minus Query 19911 CTGGAATCGCAAGCCGCCGCTCTTGGAAAAACAAAAGCCGAATTGCTGGAAATGAAAGCG 19970 |||||| ||| | | | || | |||||||| || ||| || | || | ||||| Sbjct 4722 CTGGAAGAGCAGGTCACAGCAATCGGAAAAACGCGCGCAGAACTGTTAGAGCTAAAAGCA 4663 Query 19971 GCGCAACTTGGCGTAAGTGCTCAGGCAGCGCCATTTATCGCACAGCTTAAAGCGCAAGAA 20030 || ||||||||||| | || || || || | ||||| | || |||| ||| || Sbjct 4662 GCCCAACTTGGCGTGTCCGATCGTGCTGCACCGATGATCGCCCGACTGAAAGAGCAGGAG 4603 Query 20031 AAACAGATGAAGTTAACCGGAATTAGCGCGGGGCAATATAACCAGGCCATGCGAATGCTT 20090 || | ||||| | | || |||||||||||||| | | || ||||| || Sbjct 4602 GAAGCGTGGAAGTCAGGAGCGATCAGCGCGGGGCAATACCGCAACGCGATGCGTTATCTC 4543 Query 20091 CCGGCTCAGATCACTGACGTTGTAACGTCGCTGGCTTCCGGTATGCCTGTTTGGTTGGTT 20150 ||| || || || ||| |||| || || ||||| ||||||||||| |||| |||| Sbjct 4542 CCGATGCAAATGACCGACATTGTGACCTCACTGGCGTCCGGTATGCCGGTTTATATGGTG 4483 Query 20151 GCAATCCAGCAGGGTGGACAGATTAAAGATTCTTTCGGCGGTGTTGGTAATACGTTTAAA 20210 || || |||||||| || ||| | ||||| || |||||||| ||| | | ||| Sbjct 4482 GCCATTCAGCAGGGCGGCCAGCTGCGCGATTCGTTTGGCGGTGTAAACAATGCTCTGAAA 4423 Query 20211 GCGCTGTTGTCGTTTCTGAATCC 20233 ||| |||||||| | ||| ||| Sbjct 4422 GCGATGTTGTCGATGGTGACTCC 4400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159561400671392