Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009540.1
Length=49902
Score E
Sequences producing significant alignments: (Bits) Value
seq997 114 4e-21
>seq997
Length=29618
Score = 114 bits (126), Expect = 4e-21
Identities = 219/323 (68%), Gaps = 0/323 (0%)
Strand=Plus/Minus
Query 19911 CTGGAATCGCAAGCCGCCGCTCTTGGAAAAACAAAAGCCGAATTGCTGGAAATGAAAGCG 19970
|||||| ||| | | | || | |||||||| || ||| || | || | |||||
Sbjct 4722 CTGGAAGAGCAGGTCACAGCAATCGGAAAAACGCGCGCAGAACTGTTAGAGCTAAAAGCA 4663
Query 19971 GCGCAACTTGGCGTAAGTGCTCAGGCAGCGCCATTTATCGCACAGCTTAAAGCGCAAGAA 20030
|| ||||||||||| | || || || || | ||||| | || |||| ||| ||
Sbjct 4662 GCCCAACTTGGCGTGTCCGATCGTGCTGCACCGATGATCGCCCGACTGAAAGAGCAGGAG 4603
Query 20031 AAACAGATGAAGTTAACCGGAATTAGCGCGGGGCAATATAACCAGGCCATGCGAATGCTT 20090
|| | ||||| | | || |||||||||||||| | | || ||||| ||
Sbjct 4602 GAAGCGTGGAAGTCAGGAGCGATCAGCGCGGGGCAATACCGCAACGCGATGCGTTATCTC 4543
Query 20091 CCGGCTCAGATCACTGACGTTGTAACGTCGCTGGCTTCCGGTATGCCTGTTTGGTTGGTT 20150
||| || || || ||| |||| || || ||||| ||||||||||| |||| ||||
Sbjct 4542 CCGATGCAAATGACCGACATTGTGACCTCACTGGCGTCCGGTATGCCGGTTTATATGGTG 4483
Query 20151 GCAATCCAGCAGGGTGGACAGATTAAAGATTCTTTCGGCGGTGTTGGTAATACGTTTAAA 20210
|| || |||||||| || ||| | ||||| || |||||||| ||| | | |||
Sbjct 4482 GCCATTCAGCAGGGCGGCCAGCTGCGCGATTCGTTTGGCGGTGTAAACAATGCTCTGAAA 4423
Query 20211 GCGCTGTTGTCGTTTCTGAATCC 20233
||| |||||||| | ||| |||
Sbjct 4422 GCGATGTTGTCGATGGTGACTCC 4400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159561400671392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |