Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009816.1
Length=70579
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 235 2e-57
>seq1039
Length=27060
Score = 235 bits (260), Expect = 2e-57
Identities = 450/651 (69%), Gaps = 18/651 (3%)
Strand=Plus/Plus
Query 59910 TCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGAACCTCTGCGATGGTCTGGAAC 59969
|| ||| |||| | ||| |||||||| ||||||||||||| || || | ||||||||
Sbjct 14256 TCCTCGTACATGATGTACGGATAGCCGGACTCAAACTGAATTTCGGCAAGCGTCTGGAAG 14315
Query 59970 AGCTTTCGAGCGTCGATAAAGGTCTTA--GCG-ATCCTATCATCTTTTAGCCACGTGTCG 60026
| | || |||| ||| ||| || ||| || | ||| || ||| | ||||
Sbjct 14316 AAATCGCGGGCGTTGAT---GGTTTTTTTGCGGATGCGATCGTCGGCCAGCAGCTCGTCG 14372
Query 60027 TACATCTCGGTTACGGAGAACTCGGACAGTGACTTT-CCGTACACCTTATTGATGTCATA 60085
|||| |||| ||| | | ||| || | |||| ||||| | | | ||||||
Sbjct 14373 TACAGCTCGCTTATCGCCACGTCGC-CAAAGGCTTTGCCGTAAATTCGCTCAACGTCATA 14431
Query 60086 AGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATCAGGAAC 60145
|| ||||| || ||||| | |||| || || || || |||| ||| || |
Sbjct 14432 CGGCGAGAAAAGCGCCATGTCGGCATTCTCTTTAGCCAGCTTAAAGGTGATATCCGGGAT 14491
Query 60146 GATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGT 60205
| || || || || || || || || ||||| || |||||||||||||| ||||||||
Sbjct 14492 CACCACGCCCAGCGACAGGGTTTTGATGCGGATTTTTTCGTCGGCGTTTTCGCGCTTGGT 14551
Query 60206 ATCCAGG-AACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCT 60264
||| ||| ||||| || |||||||||||||| |||| || ||| ||||| || |||||||
Sbjct 14552 ATCGAGGAAACGC-AGAATGTCGGGGTGGTGCGCGTGCAGATAAACCGCGCCCGCGCCCT 14610
Query 60265 GCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGA 60324
| | || || || ||||| | |||||||||| |||||| || |||||||| || ||||
Sbjct 14611 GACGCGCGCCAAGCTGGTTGGCGTAGGAGAAGGCATCTTCCAGCATCTTCATGACCGGGA 14670
Query 60325 TGACTCCAGAGGCCTGACCTTCTCGACCCTTAATCGGAGCTCCTGCCTCGCGGAGGTTGG 60384
| || || |||| ||| ||| || ||||||||| || || || || || ||||| |
Sbjct 14671 TCACGCCGGAGGACTGGTTTTCGATACGCTTAATCGGCGCGCCCGCTTCACGCAGGTTCG 14730
Query 60385 AGAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAG---AGAGTCCTGAACGA 60441
||| || | || ||||| || || || || ||||| || |||| | ||
Sbjct 14731 AGAGCAGAAACGCCACGCCGCCGCCGCGTTTGGAGAGCTGCAGCGCCGAGTTC---ACCG 14787
Query 60442 TTCGACCGATGGACCCCATGGTGTCCTGAACATCGAGGATGAAGCATGATACTGGCTTGC 60501
|| || || ||| |||| | || | || || | |||||| || || ||| ||
Sbjct 14788 CGCGGCCTATCGACTCCATATTATCTTCAATGCGCAGCAGGAAGCAGGAGACCAGCTCGC 14847
Query 60502 CTGCGTCGAGAAGCCCCGC-GTTGAGGAAGGTCGGAGTTGCAGGCTGGAAG 60551
| ||| | | |||| |||||| |||||||| || ||||||||||||
Sbjct 14848 C-GCGCTGGGCTTTGCCGCAGTTGAGAAAGGTCGGCGTGGCAGGCTGGAAG 14897
Score = 140 bits (154), Expect = 1e-28
Identities = 289/423 (68%), Gaps = 14/423 (3%)
Strand=Plus/Plus
Query 58392 TACAAAGCGCAGCTTAGGCAACCTTCCACTTCCGTGCCTTCTACCG--ACTTAGCAGAGG 58449
|||| |||||| | ||| ||||| | ||| |||||||| | || | | || |||
Sbjct 13221 TACAGCGCGCAGGACACGCAGCCTTCGATTTCGGTGCCTTCCAGCGCAAGCTGGCGCAGG 13280
Query 58450 TTCGGATGTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAA 58509
|| |||||||| || | ||| | || ||||| ||||||||||||||| ||| |
Sbjct 13281 --CGAATGTAGTAGAGCGTCTTGATACCTTTCTTCCACGCGTAGATCTGCGCTTTGTTGA 13338
Query 58510 TGTCTCGCGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCC 58569
|||| ||||| || || ||||| |||||||||||||| || |||| ||||| || ||
Sbjct 13339 TGTCCCGCGTGGTGGCGGTATCCGGGAAGAACAGCGTCAGCGACAGCCCCTGATCCACGT 13398
Query 58570 AAGGAGATGCTACAGCGTACATATCAATGATCGGGTTAGGTCCGATAGCGTAAGCG--CT 58627
| || | ||||| |||| ||||| | || || || |||| ||| ||
Sbjct 13399 GTTTCGTCGCCTCGGCGTAGGTATCGATGATTTTTTCCGGGCCAATCTCGTATGCGTCCT 13458
Query 58628 -ATCAATTGATTCTACATTCTCATTGGTC--ACTCCGTACTGAGGGTAATAGACTCGACC 58684
|| | | | | ||||| |||||| | | | | |||||| || || || ||
Sbjct 13459 GATACAGCG---CCAGGTTCTCGTTGGTCATAAACGGGGC--AGGGTAGTAAACGCGTCC 13513
Query 58685 AAGCTTACCCTCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGC 58744
|| || || ||||||| |||| || | |||||||| | ||||||
Sbjct 13514 GGTTTTGCCTTCTTTGCGAATTTCAATCTTCGACACGATCGGGTGAATGCTCGACGTGGC 13573
Query 58745 ATGGTTAATGTACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGGTTCTGGTTGTAAAT 58804
||||| ||||| ||||||||||||||||| || | |||||| |||||||||||||| ||
Sbjct 13574 GTGGTTGATGTAGGAGATAGAGCCGGTTGGCGGCACCGCCTGCAGGTTCTGGTTGTAGAT 13633
Query 58805 ACC 58807
||
Sbjct 13634 GCC 13636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 225723064598360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |