Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq197 136 9e-27
seq1030 109 1e-18
>seq197
Length=620651
Score = 136 bits (150), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | |||||| | |||| ||| ||||| || || || ||||| |
Sbjct 446934 CCACCTCGCAGACGAAGTACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAC 446993
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
|| ||||| || ||||| || || || || ||||||||||||||||| || |||
Sbjct 446994 AGGGTGCGGCCATCTTCCAACTGCTTACCAGCGAAGATCAGACGCTGCTG---GTCTGGA 447050
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || || |||||||| || ||||| || || || |||| |||| | ||
Sbjct 447051 GGGATGCCCTCCTTGTCCTGGATCTTAGCTTTAACATTCTCGATAGTATCGGCTGGCTCG 447110
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| || || || || |||||||||||||| ||||||||
Sbjct 447111 ACCTCAAGAGTGATAGTTTTACCAGTAAGAGTCTTGACGAAAATCTGCAT 447160
Score = 134 bits (148), Expect = 3e-26
Identities = 169/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| || | ||||| | |||| ||| || || || || || |||||||
Sbjct 447878 CCTCCGCGCAGACGCAGTACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAT 447937
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
|| ||||| || ||||||| ||| || || ||||||||||||||||| || |||
Sbjct 447938 AGGGTGCGGCCATCTTCTAGTTGCTTACCAGCGAAGATCAGACGCTGCTG---GTCTGGG 447994
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || || |||||||| || || || || || || || | || | |||
Sbjct 447995 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCA 448054
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| || ||||| ||||| || ||||||||||| ||||| |||||||||
Sbjct 448055 ACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCATT 448105
Score = 125 bits (138), Expect = 2e-23
Identities = 167/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | | ||| | |||| ||| || |||||||| || |||||||
Sbjct 446250 CCACCACGGAGACGTAATACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAC 446309
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || || || | ||||| || |||||||| |||||||| || ||||||
Sbjct 446310 AAGGTGCGACCATCCTCCAGCTGTTTACCGGCGAAGATGAGACGCTGCTGG---TCTGGG 446366
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || |||||||| || || || || || || || | || | |||
Sbjct 446367 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCA 446426
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| || ||||| ||||| || ||||||||||| ||||| |||||||||
Sbjct 446427 ACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCATT 446477
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||||||||| | | || || |||||||||| |||||| || ||||||
Sbjct 446742 TCTTTCTGGATATTATAGTCTGACAATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAG 446801
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || ||||| || ||||| ||||| || || ||||| || || ||||| ||
Sbjct 446802 ATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTC 446861
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || | ||| ||||| || ||||| ||||| || || || || || |||
Sbjct 446862 TCGATGGTGTCTGAAGCTTCAACTTCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACG 446921
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 446922 AAAATCTGCAT 446932
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||||||||| | | || || |||||||||| |||||| || ||||||
Sbjct 448899 TCTTTCTGGATATTATAGTCAGACAATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAG 448958
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || ||||| || ||||| ||||| || || ||||| || || ||||| ||
Sbjct 448959 ATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTC 449018
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || | ||| ||||| || ||||| ||||| || || || || || |||
Sbjct 449019 TCGATGGTGTCTGAAGCTTCCACTTCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACG 449078
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 449079 AAAATCTGCAT 449089
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||||| | ||||| |||||||| | || || || ||||||
Sbjct 449602 TCTTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCGTCTTCAAGCTGCTTGCCAGCGAAG 449661
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || ||||| || ||||| |||||||| ||||| || |||||
Sbjct 449662 ATGAGACGCTGCTGGTCGGGCGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTAACGTTC 449721
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || | || || || | ||||| || ||||| ||||| ||||| |||
Sbjct 449722 TCGATGGTGTCTGCAGGCTCGACCTCCAAAGTGATGGTTTTCCCAGTCAGGGTCTTCACG 449781
Query 288463 AATATCTGCAT 288473
|||||||||||
Sbjct 449782 AATATCTGCAT 449792
Score = 114 bits (126), Expect = 3e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || ||||||| | || ||||||| || || || ||||| || ||||| |
Sbjct 446477 TCCTCCTCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGA 446536
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| ||||| |||||||||| || || || ||||||||||||||||| || ||
Sbjct 446537 TAAGGTGCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGG 446596
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||| || || ||||| || || || || || || || | || | ||| ||
Sbjct 446597 AATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGAC 446656
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| || ||||| ||||| || ||||| || || ||||| ||||||||
Sbjct 446657 TTCTAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 446704
Score = 114 bits (126), Expect = 3e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || ||||||| | || ||||||| || || || ||||| || ||||| |
Sbjct 448105 TCCTCCTCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGA 448164
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| ||||| |||||||||| || || || ||||||||||||||||| || ||
Sbjct 448165 TAAGGTGCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGG 448224
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||| || || ||||| || || || || || || || | || | ||| ||
Sbjct 448225 AATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGAC 448284
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| || ||||| ||||| || ||||| || || ||||| ||||||||
Sbjct 448285 TTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 448332
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||||| | ||||| || || || | ||||| || ||||||
Sbjct 447686 TCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCCAGCTGTTTACCAGCGAAG 447745
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| ||||||||||| ||||| || || || || ||||| || || ||||| ||
Sbjct 447746 ATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTC 447805
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || | ||| ||||| || ||||| ||||| || |||||||| ||||||
Sbjct 447806 TCGATGGTGTCTGAAGCTTCAACTTCCAGGGTGATGGTCTTTCCTGTCAGAGTTTTGACG 447865
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 447866 AAAATCTGCAT 447876
Score = 104 bits (114), Expect = 6e-17
Identities = 140/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||||| | ||||| || || |||| || || || ||||||
Sbjct 448399 TCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCTAGCTGGTTGCCGGCGAAG 448458
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| | ||| || |||||| ||||| ||||| || ||||| || ||||| ||
Sbjct 448459 ATCAACCTCTGCTGG---TCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCTTTGACA 448515
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || || | ||| ||||| || ||||| ||||| || ||||||||||||
Sbjct 448516 TTCTCAATGATGTCTGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTG 448575
Query 288460 ACGAATATCTGCAT 288473
|| || ||||||||
Sbjct 448576 ACAAAGATCTGCAT 448589
Score = 86.0 bits (94), Expect = 1e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396
|||||||| ||||||||||| ||||| || || || || ||||| || |||||
Sbjct 448725 GCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCTTTG 448784
Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || || | || | ||| ||||| || ||||| ||||| || ||||||||
Sbjct 448785 ACATTCTCAATGGTGTCTGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTT 448844
Query 288457 TTGACGAATATCTGCAT 288473
|| ||||| ||||||||
Sbjct 448845 TTCACGAAAATCTGCAT 448861
>seq1030
Length=27445
Score = 109 bits (120), Expect = 1e-18
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| || ||||||| || || || || || || | ||||| || |||||
Sbjct 2709 TTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCCAGCTGTTTACCAGCGAA 2768
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||||| ||||| || ||||| || || || |||||||| || ||||| || ||
Sbjct 2769 GATCAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCTTTGACATT 2828
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | ||| | || || || || ||||| ||||| || || || ||||| ||
Sbjct 2829 TTCGATGGTGTCGGAAGCCTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTCAC 2888
Query 288462 GAATATCTGCATTATGTT 288479
||| |||||||| ||||
Sbjct 2889 GAAGATCTGCATATTGTT 2906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179627284906332
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