Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_010105.1 Length=170523 Score E Sequences producing significant alignments: (Bits) Value seq974 113 5e-20 >seq974 Length=31311 Score = 113 bits (124), Expect = 5e-20 Identities = 245/367 (67%), Gaps = 0/367 (0%) Strand=Plus/Plus Query 141976 TCGACACCTTTGTTGTTTTTCAAAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGA 142035 || ||||| ||||||||||| || ||||| |||| ||||||| ||||| ||||| Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60 Query 142036 TAATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTC 142095 || | || ||||| ||||| || | || || || || || ||||| || || ||| Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120 Query 142096 TGGAAATGTTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGA 142155 ||||| || || |||| || ||| ||||| || ||||||| || ||| | Sbjct 121 TGGAAGTGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGGG 180 Query 142156 GAACCTTCAGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTAT 142215 || ||||| || ||| ||||||| || ||||| ||||| | |||| |||| Sbjct 181 CTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTAT 240 Query 142216 TCAATTATTGAGTTGGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCTTCAATAACC 142275 | | || | | ||| || ||| || || | ||| ||| || || || | Sbjct 241 TTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAGT 300 Query 142276 ACACAAGAACTAAATTGACGAGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGGCAAC 142335 || || || || || ||||| ||||| || || | |||| ||| || || ||||||| Sbjct 301 ACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAGA 360 Query 142336 GAAACCT 142342 |||| || Sbjct 361 GAAATCT 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545533366139920