Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq486 125 9e-24
>seq486
Length=217039
Score = 125 bits (138), Expect = 9e-24
Identities = 257/379 (68%), Gaps = 5/379 (1%)
Strand=Plus/Plus
Query 114274 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333
||| | ||| |||| || ||||||||||| || | ||| || || || || ||||| ||
Sbjct 175475 CAATACAAAAGCATCGGCCAGACCTTGGACGCCAATGCCGATAGGTCGGTGCCTCATGTT 175534
Query 114334 AGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 114392
||||||| || ||| |||||||| |||| |||||||| | | || || || |
Sbjct 175535 AGACTTTTTCGCT-TCTGGGACGGGATAGTAATTAACATCGATAATCTTGTTCAGGTTCT 175593
Query 114393 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 114452
|| | | || || | || | || || || ||||| | | | | |||
Sbjct 175594 CAGTTATGATTTTGGTCACTTGTTTTAGTTTCTCAAAATCATATGTTTTATT---TTCGG 175650
Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512
| ||| || | | || |||||||||| || || |||| ||||| | |
Sbjct 175651 TTACAAACATGTTGACAGCAATTGACGCCAAGTTGCAAACAGCTACTTCATCAGCAGATG 175710
Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572
||||||| | ||| ||||| || | ||| | || ||||| ||||| ||||||||||
Sbjct 175711 TGTACTCAACAATCTCCGTGCATAGATTGCTGCATTTGATGGTTCCCAAATTCTTTTGAT 175770
Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632
| |||| |||| || ||||| ||||||||||||||||| || || ||||| ||| |
Sbjct 175771 TGCTCTTTCTGTTGCATGCATCTTTGTAAAGCATGTATGGAGTTCCAGTCTCTACTTGTG 175830
Query 114633 ACTTGAGAATAGCCTTCCA 114651
|| | ||||||||||||
Sbjct 175831 CCTCAATAATAGCCTTCCA 175849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597340204345520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |