Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq813 132 1e-26 >seq813 Length=55966 Score = 132 bits (146), Expect = 1e-26 Identities = 159/213 (75%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 32827 CCGCCAAGCATCTGCATGACGCCACCCATTTGTGGAATGACAATCTCAGTGGTGTATTTG 32886 ||||| |||||||||||| || || | | | | |||| || |||||||| || Sbjct 13440 CCGCCCAGCATCTGCATGGTACCGCCAACGTTT---ACCACAACTTCGGTGGTGTACTTC 13496 Query 32887 TCCACGCCGCTGCTG-TCAGTCCACTTACGAGTGCGAAGTTGTCCTTCTATATAAACCTG 32945 || ||||| ||| || ||||| ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 13497 TCAGCGCCGGA-CTGATCGGTCCATTTACGGGTGCGCAGTTGGCCTTCGATATAGACCTG 13555 Query 32946 CGACCCTTTACGAAGATACTCTCCTGCAACTTCCGCAATTTTTCCGAAGATAACAACTCG 33005 || |||||||| |||||||| || |||||||| || | ||| || || | || || || Sbjct 13556 AGAACCTTTACGCAGATACTCACCGGCAACTTCTGCCAGTTTGCCAAACAGCACCACGCG 13615 Query 33006 ATGCCATTCAGTATGTTCTTTCTTTTCTCCTGT 33038 ||||||||||| || |||||| | || || || Sbjct 13616 GTGCCATTCAGTCTGCTCTTTCATCTCACCGGT 13648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144038531373764