Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_010583.1
Length=111382
Score E
Sequences producing significant alignments: (Bits) Value
seq637 118 8e-22
seq236 89.7 4e-13
>seq637
Length=122170
Score = 118 bits (130), Expect = 8e-22
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 29159 TTATATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAGTGC 29218
||| || | |||||| || ||||| | |||||||| | ||| ||||| ||||| |
Sbjct 107106 TTACATGGACTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGA 107165
Query 29219 ATTAAATCGAACAGCATAGCCAGAGACACGAATGGTCAACTGAGGGTATTTTTCAGGATG 29278
||||| || || || |||||||| ||||| ||||||| |||||| ||||| ||||||||
Sbjct 107166 GTTAAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225
Query 29279 TTTCTGTGCATCCAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCC 29338
|| | ||||| | ||| ||||| | | || || || || ||||||||||| ||
Sbjct 107226 TTCCATCGCATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACC 107285
Query 29339 CTCGA 29343
||||
Sbjct 107286 TTCGA 107290
>seq236
Length=545527
Score = 89.7 bits (98), Expect = 4e-13
Identities = 124/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 29171 AGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAGTGCATTAAATCGAAC 29230
|||||| ||||| ||||||||| ||| ||||| | ||||| | || || || ||
Sbjct 30883 AGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCGTAC 30824
Query 29231 AGCATAGCCAGAGACACGAATGGTCAACTGAGGGTATTTTTCAGGATGTTTCTGTGCATC 29290
||||| ||||| || |||||||||| ||| ||||||||||| || || | || ||
Sbjct 30823 CGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGCGTC 30764
Query 29291 CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTCGAC 29344
|| ||| || || | | || || || || ||||||||||| || || ||
Sbjct 30763 CATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTCCAC 30710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356289809775662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |