Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 444 6e-120
>seq1039
Length=27060
Score = 444 bits (492), Expect = 6e-120
Identities = 672/951 (71%), Gaps = 16/951 (2%)
Strand=Plus/Minus
Query 155933 GCGCCATCAACTGGAACCGCGTGATC---GACGAGAAGGACGCGGAGGTGTGGAACCGGC 155989
||||| | ||||||||| |||| |||||||| || ||| ||||||||||| |
Sbjct 13191 GCGCCGTTAACTGGAACAA---GATCCAGGACGAGAAAGATCTGGAAGTGTGGAACCGCC 13135
Query 155990 TGACCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGC 156049
|||||| |||||||||||||||||| ||| ||||| | ||||| || | | | | ||||
Sbjct 13134 TGACCAGCAACTTCTGGCTGCCGGAAAAGGTCCCGCTCTCCAACGATATTCCGGCCTGGC 13075
Query 156050 ACCAGCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGC 156109
| |||| | | |||| | | | || || || || || |||||||||||| |||
Sbjct 13074 AAACCCTGAGCCACACCGAGCAGCAGCTAACGATCCGCGTCTTTACCGGCCTGACGCTGC 13015
Query 156110 TGGACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGC 156169
|||||||||| ||| ||||| ||||| | || || ||||| | || ||||
Sbjct 13014 TGGACACCATTCAGAATACCGTTGGCGCACCGGCTCTGATGGGTGACGCGCTGACGCCGC 12955
Query 156170 ACGAGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTAC- 156228
|||| ||||||||| | |||||| || |||||| |||||||| ||| ||||
Sbjct 12954 ACGAAGAGGCGGTGATGTCGAACATCAGCTTTATGGAGGCGGTGCACGCCCGCTCCTACA 12895
Query 156229 --TCGAACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGT 156286
|||| | ||||| ||||||||| ||||| || | ||||| || | | ||||
Sbjct 12894 GCTCGA---TTTTCTCCACGCTGTGCCAGACCAAAGACGTGGACGCGGCCTACGCCTGGA 12838
Query 156287 CGGAGGAGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTG 156346
|| | || || | || | ||||| ||| | ||||| | || || | |
Sbjct 12837 GCGAAGCGAGCGAGTCGTTACAAAGAAAGGCGGAGCTGGTGCTGACGTATTATCGGGCCG 12778
Query 156347 ACGACCCGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCG 156406
|||| ||||| ||| ||| ||||| | | | ||||| ||||| ||||| |
Sbjct 12777 ACGAGCCGCTGAAGAAGAAGATCGCCAGCGTGTTTCTGGAATCATTCCTCTTCTATTCTG 12718
Query 156407 GCTTCTACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGA 156466
|||||| ||||| |||| |||||| || ||||||||||||||||||||||| |||
Sbjct 12717 GCTTCTGGCTGCCCATGTACTGGTCAAGCCGCGGCAAGCTCACCAACACCGCCGATTTGA 12658
Query 156467 TCCGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGA 156526
| || |||||||||||||| || || |||||||| || ||||||||||| || | ||||
Sbjct 12657 TTCGCCTCATCATCCGGGATGAAGCGGTGCACGGGTATTACATCGGCTATAAATATCAGA 12598
Query 156527 AGGGCCTGGAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGC 156586
| || ||||| |||| | | | || | |||| || || | | | ||
Sbjct 12597 AAGGGCTGGAAAAGGTCAGCGACGCGGAGCGCGAGGAGCTTAAAGGGTTTGCGCTCGATT 12538
Query 156587 TGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCG 156646
||||| | || |||| ||||||||||| | || ||| |||| || |||| || |||||
Sbjct 12537 TGCTGATGGATCTGTACGACAACGAGCTGAGCTATACCGAGGAACTGTACGCCGGCACCG 12478
Query 156647 GCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACC 156706
|| | ||||||||||| ||||| | ||||||| ||||||||| ||| ||| |
Sbjct 12477 GCTGGGAGGAGGACGTGAAAGCCTTCCTCTGCTACAACGCCAACAAGGCGCTGATGAATC 12418
Query 156707 TGGGCTACGACGCGCTGTTCAGCCGCAGCGACTG--CGACGTCAACCCGGCCATCCTGAG 156764
| |||||||||||||||||| |||| | |||| || || |||||||| || ||
Sbjct 12417 TCGGCTACGACGCGCTGTTC--CCGCCGGAACTGGCGGAGGTTAACCCGGCGATTCTCTC 12360
Query 156765 CGCGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTA 156824
||||||||||||| | ||||| |||||||| |||||||| |||||||| ||||
Sbjct 12359 CGCGCTGTCGCCCAACGCCGACGAAAACCACGATTTCTTCTCCGGGTCGGGTTCGTCGTA 12300
Query 156825 CGTCATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGATG 156875
||| |||| ||| | |||| ||||| || || |||||||| || | |||
Sbjct 12299 CGTGATGGGCAAAGCGGTGGAAACCGAGGATGAGGACTGGGATTTTTAATG 12249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526586591030880
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