Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq197 122 6e-23
seq1030 87.8 1e-12
>seq197
Length=620651
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
|| ||||| | || |||||| | |||||||||||| || || || |||||||| || | |
Sbjct 446478 CCTCCTCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAT 446537
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | | ||||||||| || || |||||| | |||| |||||| ||||| ||
Sbjct 446538 AAGG-TGCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGG 446596
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
||| ||||||||||| || || |||||| | || || || || | ||| ||
Sbjct 446597 AATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGAC 446656
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||| ||||| || || ||||| ||||| || ||||| ||||||
Sbjct 446657 TTCTAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCATA 446705
Score = 118 bits (130), Expect = 8e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
|| ||||| | || |||||| | |||||||||||| || || || |||||||| || | |
Sbjct 448106 CCTCCTCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAT 448165
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | | ||||||||| || || |||||| | |||| |||||| ||||| ||
Sbjct 448166 AAGG-TGCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGG 448224
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
||| ||||||||||| || || |||||| | || || || || | ||| ||
Sbjct 448225 AATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGAC 448284
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | ||| ||||| || || ||||| ||||| || ||||| ||||||
Sbjct 448285 TTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCATA 448333
Score = 104 bits (114), Expect = 2e-17
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022
||||| | ||| |||||||| || || || |||||||| ||| || || || | |
Sbjct 447665 AAAACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCG--GACAAGGTGCGACCAT 447722
Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082
| || | ||||| |||||| | || | ||||||||||||| || || || |||||||
Sbjct 447723 CCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGT 447782
Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142
| || ||| || ||| | || || || || | ||| || || | ||| ||||
Sbjct 447783 CTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGGGTGATGG 447842
Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || |||||||||||||| || ||||| ||||||
Sbjct 447843 TCTTTCCTGTCAGAGTTTTGACGAAAATCTGCATA 447877
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| |||| | || || || ||||| || || ||||| || || || || || ||
Sbjct 446706 CCACCACGCAGACGCAATACCAAGTGAAGAGTCGACTCTTTCTGGATATTATAGTC--TG 446763
Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| || ||||||||| |||||| || ||| | || | ||||| |||||| |
Sbjct 446764 ACAATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAG 446823
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| || ||| || ||| | || || || || | ||| |
Sbjct 446824 GGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAA 446883
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || | || || || || || || || ||||| || ||||| ||||||
Sbjct 446884 CTTCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCATA 446933
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| |||| | || || || |||||||| || ||||| || || || || || |
Sbjct 448863 CCACCACGCAGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCA--G 448920
Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| || ||||||||| |||||| || ||| | || | ||||| |||||| |
Sbjct 448921 ACAATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAG 448980
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| || ||| || ||| | || || || || | ||| |
Sbjct 448981 GGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCCA 449040
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || | || || || || || || || ||||| || ||||| ||||||
Sbjct 449041 CTTCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCATA 449090
>seq1030
Length=27445
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 14962 CTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG 15021
|| || || || ||||||||||| || || || |||||||| ||| || | | |
Sbjct 2686 CTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCA 2745
Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081
|| || | ||||| |||||| | |||| ||||| ||||| || || || ||||||
Sbjct 2746 TCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTG 2805
Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
|| || ||| ||| ||| |||| || || ||| | || || || | ||| |||
Sbjct 2806 TCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCCACCTCAAGGGTGATG 2865
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| || || || || || || || || || ||||||||
Sbjct 2866 GTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCATATT 2903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357384185847290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |