Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq486 345 4e-90
seq1030 107 2e-18
seq197 100 3e-16
>seq486
Length=217039
Score = 345 bits (382), Expect = 4e-90
Identities = 897/1364 (66%), Gaps = 10/1364 (1%)
Strand=Plus/Minus
Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975
|| || ||||| ||||| || | || ||| | ||||| ||||||||| ||| | |
Sbjct 176515 CAGCACATGCTGATGCGGGTGTCCATCGGCATCCACGGCGCCGACATCGACGCCGCCATC 176456
Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035
|| ||| | || | || | || | ||||||||||| || ||||| ||||| |
Sbjct 176455 ACCACCTACAACCTGCTCTCCGAGAAGTACTTCACGCACGCCAGCCCCACCCTGTTCTCG 176396
Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095
|||| ||| |||||| | || || ||||| | || || || || ||||||
Sbjct 176395 GCCGCCACCCCCCGCCCTCAGCTCTCCTCATGTTTCCTCATCGCCATGAAGGACGACAGC 176336
Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGC 123155
||| |||||||| || ||| || | || || || || ||||||| | ||||||
Sbjct 176335 ATCGAAGGTATCTACGACACTCTGAAGCAGTGTGCATTAATATCCAAATCCGCGGGCGGC 176276
Query 123156 ATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGGA 123215
||||| || | || || | | |||| || | | |||| |||| ||||
Sbjct 176275 ATAGGAGTTCATGTTCATTGCATCAGAGCGAAAGGCACCTACATCGCGGGCACGAACGGC 176216
Query 123216 ATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGAC 123275
|| || |||||| | |||||||||| || ||||| ||| | | ||| |||| |||
Sbjct 176215 GTCTCCAACGGGCTGGTGCCCATGCTGCGCGTGTACAACAACACGGCGCGCTACGTGGAC 176156
Query 123276 CAGGGCGGCAAA---CGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGAT 123332
||||||||||| || ||||| | || |||| || || |||||||||| |||
Sbjct 176155 CAGGGCGGCAACAAGCGGCCCGGCGCCTTCGCCGTCTACCTCGAGCCGTGGCACGCTGAC 176096
Query 123333 GTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGAT 123392
| | ||| || || | || || |||| ||| || ||| | || || ||
Sbjct 176095 ATATTCGAGTTCCTAGACTTGAAGAAGAACACGGGCAAAGAGGAAGTGCGCGCGCGAGAG 176036
Query 123393 TTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTG 123452
|||| || ||| | ||| | | ||| | || ||| | || | || ||| | |
Sbjct 176035 CTGTTCTATGCTCTGTGGATCTCAGATCTATTCATGAAGAGGGTTGAGAACAACGAGGAG 175976
Query 123453 TGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTT 123512
||| || ||||| || | | || |||||| || || || || | |||
Sbjct 175975 TGGAGCCTTATGTGCCCTCACGACAGCCCTGGCTTGGCTGATTGTTGGGGAGATGAATTT 175916
Query 123513 GACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGTTCCGGCACGT 123572
|| | || || | |||| || | ||||| | |||| | || | || |
Sbjct 175915 GATGCATTATATCAGAAATATGAACAAGAAGGTAGGTTTGTTAAAAAAGTCCGCGCTCAA 175856
Query 123573 GATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTAC 123632
| | || |||||| || ||||||| || || ||||| || |||||||| |||
Sbjct 175855 ATCCTATGGAAGGCTATTATTGAGGCACAAGTAGAGACTGGAACTCCATACATGCTTTAC 175796
Query 123633 AAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAAT 123692
||||| || |||||||| || | |||||| | || |||||||| || ||||| || |||
Sbjct 175795 AAAGATGCATGCAACAGAAAGAGCAATCAAAAGAATTTGGGAACCATCAAATGCAGCAAT 175736
Query 123693 CTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCT 123752
|| ||| | || ||| | || |||| ||| ||| |||| || || || || |||||
Sbjct 175735 CTATGCACGGAGATTGTTGAGTACACATCTGCTGATGAAGTAGCTGTTTGCAACTTGGCG 175676
Query 123753 TCGATTTGCGTGAATCGTTGCGT---CGAAAACGGCGCTTTTAATTTCCAAACGCTCAAA 123809
|| ||| || || | || |||||| | | | |||| | | || |||
Sbjct 175675 TCAATTGCTGTCAACATGTTTGTAACCGAAAATAAAACATATGATTTTGAGAAACTAAAA 175616
Query 123810 CGCATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCT 123869
| | || |||| || |||| ||||||| |||||||||||||||| |||||
Sbjct 175615 CAAGTGACCAAAATCATAACTGAGAACCTGAACAAGATTATCGATGTTAATTACTATCCC 175556
Query 123870 TTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGG 123929
| |||||| |||||| ||| ||| |||| |||| | ||| | |||||
Sbjct 175555 GTCCCAGAAGCGAAAAAGTCTAACATGAGGCACCGACCTATCGGCATTGGCGTCCAAGGT 175496
Query 123930 TTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTT 123989
||||||| || |||||| || ||||| | || ||||| || || | ||| || |||
Sbjct 175495 CTGGCCGATGCTTTTGTATTGATGCGCCTTCCTTACGAGAGTGAAGGAGCCCAGAAGCTC 175436
Query 123990 AATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCG 124049
||| |||||| ||||| || ||||| || ||||| || || ||||| ||||| ||
Sbjct 175435 AATCAACAAATATTTGAAACCATCTATTATGGGGCTTTAGAAGCTAGCTGTGAACTGGCC 175376
Query 124050 AAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAG 124109
||| | ||||| || |||| || || || | ||||| || ||| || |||||
Sbjct 175375 GAAAAACTCGGCGTTTATGAAACGTATGCTGGTTGTCCGGCCAGTGAAGGAATATTGCAA 175316
Query 124110 TACGACATGTGG--AATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAAC 124167
|| || |||||| || | ||||| ||| | ||||||||||||| | | | || ||
Sbjct 175315 TATGAAATGTGGGGAAAG--ACACCCACAGACCTGTGGGACTGGAGTGCTCTGAAGCAGA 175258
Query 124168 GCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCA 124227
|| ||| || || |||| ||||| |||||| |||| |||||| || || |||
Sbjct 175257 AGATCGCGAAACATGGCCTGCGGAACTCTCTGTTGCTGGCCCCCATGCCCACCGCCTCCA 175198
Query 124228 CTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACT 124271
|||| || ||| | || ||||| ||||| || ||||| ||||||
Sbjct 175197 CTGCACAGATTCTTGGCAACAATGAATCATTTGAGCCATTCACT 175154
>seq1030
Length=27445
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| | ||||||||||| | || || || |||||||| ||||| || || |||
Sbjct 2674 CCTCCTCTAAGCCTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 2733
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| ||| |||| ||||| || ||| | |||| ||| ||||||||||| ||
Sbjct 2734 AGGGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGG 2793
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| || || || || || || || ||||| ||| | ||||||||||| ||| ||
Sbjct 2794 ATACCCTCCTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCCACC 2853
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || | || ||||| || || || || || || || |||||
Sbjct 2854 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCAT 2900
>seq197
Length=620651
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| ||||| | || || ||||| || || || ||||| ||||| || || ||
Sbjct 446475 ATTCCTCCTCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCA 446534
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | || || || ||| | |||| || |||||||||||
Sbjct 446535 GATAAGGTGCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGA 446594
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||||||||| || ||||| || || || | || | |||||| |||| |||
Sbjct 446595 GGAATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCG 446654
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || | || ||||| || || ||||| || ||||| |||||
Sbjct 446655 ACTTCTAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 446704
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| ||||| | || || ||||| || || || ||||| ||||| || || ||
Sbjct 448103 ATTCCTCCTCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCA 448162
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| || || | || || || ||| | |||| || |||||||||||
Sbjct 448163 GATAAGGTGCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGA 448222
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||||||||| || ||||| || || || | || | |||||| |||| |||
Sbjct 448223 GGAATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCG 448282
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || | || ||||| || || ||||| || ||||| |||||
Sbjct 448283 ACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 448332
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | ||| || | || || || || || || ||||||||||| |
Sbjct 446703 ATACCACCACGCAGACGCAATACCAAGTGAAGAGTCGACTCTTTCTGGATATTATAGT-- 446760
Query 45171 CTGACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||||| | | | || || | |||||| || ||| | || | ||| |||||||| |
Sbjct 446761 CTGACAATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGG 446820
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| || |||||||| || ||||| || || || | || | |||||| |||| |
Sbjct 446821 GAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTT 446880
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | || ||||| ||||| ||||| || ||||| |||||
Sbjct 446881 CAACTTCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 446932
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | ||| || | || || ||||| || || ||||||||||| |
Sbjct 448860 ATACCACCACGCAGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGT-- 448917
Query 45171 CTGACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
| ||| | | | || || | |||||| || ||| | || | ||| |||||||| |
Sbjct 448918 CAGACAATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGG 448977
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| || |||||||| || ||||| || || || | || | |||||| |||| |
Sbjct 448978 GAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTT 449037
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | || ||||| ||||| ||||| || ||||| |||||
Sbjct 449038 CCACTTCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 449089
Score = 87.8 bits (96), Expect = 2e-12
Identities = 165/243 (68%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 45098 AACGTTTTATTTTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTG 45157
|||||| |||| | || || ||||| | || || | || || || || ||||||||
Sbjct 446234 AACGTTGTATTAATTGCCACCACGGAGACGTAATACCAAGTGAAGGGTGGACTCCTTTTG 446293
Query 45158 GATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCG 45217
||| || || ||| | ||| | ||| |||| ||||| || ||| | || | ||
Sbjct 446294 GATGTTGTAGTCGGACAAGGTGCGACCATCCTCCAGCTGTTTACCGGCGAAGATGAGACG 446353
Query 45218 TTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGT 45277
|||||||| || ||||| || || || || || || || || | || | |||
Sbjct 446354 CTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTTACATTCTCGATGGT 446413
Query 45278 GTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTG 45337
||| |||| || ||||| ||||| | || || || || ||||| || || ||||| ||
Sbjct 446414 GTCCGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTG 446473
Query 45338 CAT 45340
|||
Sbjct 446474 CAT 446476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451993063828240
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