Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq236 98.7 1e-15 >seq236 Length=545527 Score = 98.7 bits (108), Expect = 1e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 55869 TTCCGTAAAGGTGCGCGAAATAACGTCACGTTGTTGGTCTGGAGTCAGACTATTGAATCT 55928 ||| |||||||| |||| |||||||| || || || ||||| |||||| ||||| | Sbjct 30886 TTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCG 30827 Query 55929 TACGGCATATCCGCTAACGCGAATGGTTAGTTGCGGATACTTATCAGGATTAGCAACCGC 55988 ||| ||||| || ||||||||||| || ||||| || || || || | ||||||| Sbjct 30826 TACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGC 30767 Query 55989 ATCGAGAAGAAGATCGCGACTCATAACATTGATATTAGCGTGCTGACCACCTTCGAC 56045 || | || ||||| | || || || | ||| ||||||||||||||| || Sbjct 30766 GTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTCCAC 30710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532397660714720