Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_012741.1 Length=171451 Score E Sequences producing significant alignments: (Bits) Value seq974 113 5e-20 >seq974 Length=31311 Score = 113 bits (124), Expect = 5e-20 Identities = 245/367 (67%), Gaps = 0/367 (0%) Strand=Plus/Plus Query 143044 TCGACACCTTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGA 143103 || ||||| |||||||||||| || ||||| |||| ||||||| ||||| ||||| Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60 Query 143104 TAATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTC 143163 || | || ||||| ||||| || | || || || || || ||||| || || ||| Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120 Query 143164 TGGAAATGTTTCCAGAATGGAATAACACCAGTATGTTTGACTTCACCCATGCCAATACGA 143223 ||||| || || |||| || ||| || || || ||||||| || ||| | Sbjct 121 TGGAAGTGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGGG 180 Query 143224 GAACCTTCAGCACGAATCATACCAACGTTAATACCAATACCTGCACGTTTAGAAATGTAT 143283 || ||||| || ||| |||| || || ||||| ||||| | |||| |||| Sbjct 181 CTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTAT 240 Query 143284 TCAATTATTGAGTTTGCAGTTTTGTTAATAGATTTCAGTGAGTCACCTGCTTCAATAACA 143343 | | || | | | | || ||| || || | ||| |||||| || || | Sbjct 241 TTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAGT 300 Query 143344 ACACAAGAACTAAATTGACGGGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGGCAAC 143403 || || || || || ||||||||||| || || | |||| ||| || || ||||||| Sbjct 301 ACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAGA 360 Query 143404 GAAACCT 143410 |||| || Sbjct 361 GAAATCT 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548502899546640