Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_013059.1
Length=40975
Score E
Sequences producing significant alignments: (Bits) Value
seq997 145 2e-30
seq813 87.8 5e-13
>seq997
Length=29618
Score = 145 bits (160), Expect = 2e-30
Identities = 301/453 (66%), Gaps = 24/453 (5%)
Strand=Plus/Minus
Query 38418 ATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 38477
|||||| || |||||||||| |||| |||| | ||||||||| | | |||| || |
Sbjct 18254 ATGAGCTGATTAACCGCGATCATCTGCGCTGTCGTTATCTGCCTGCTGGTCTTTATGGCT 18195
Query 38478 TGGGCTGTTAATCATTACCGTGATAACGCCACCGCCTACAAAGAGCAGCGCGATAAAGCC 38537
||||| |||| || || || || ||||||| | ||||||||||||||||||||||||||
Sbjct 18194 TGGGCGATTAACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCC 18135
Query 38538 AC---------------------ATCCATCATCGCTGATATGCAGAAGCGTCAACGTGAT 38576
|| ||| |||| || ||||||| || || ||||||
Sbjct 18134 ACTGAGAAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGAT 18075
Query 38577 GTAGCAGAACTCGACGCCAGATACACAAAGGAGCTTGCTGATGCTAACGCGACTATCGAA 38636
| || | || || |||| |||||| || | |||||||| || | | || ||
Sbjct 18074 GCCGCTGCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAG 18015
Query 38637 AGTCTCCGTGCTGATGTTTCTGCTGGTCGTAAGCGCCTGCAAGTCGCCGCCACCTGT--- 38693
|||| | | ||||| |||||| |||||||| ||||| || ||| | ||||
Sbjct 18014 CGTCTGCATAGCGATGTCATTGCTGGCCGTAAGCGGCTGCAGCTCAACGCAAACTGTCCC 17955
Query 38694 GCAAAGTCAACGACCGAAGCCAGCGGCATGGGCAATGGAGAAAGCCCAAGACTTACAGCA 38753
|| || | |||||| || ||||||||||| ||| |||| |||||||| |
Sbjct 17954 GCGAACGGAGCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGAC 17895
Query 38754 GATGCTGAACTCAATTATTACCGTCTACGAAGTGGAATCGACAGGATAACCGCGCAGGTT 38813
||||||| |||||| | || ||| |||||| || | || ||||||
Sbjct 17894 TCCGCTGAACGGGATTATTTCATCCTCAGAAAGCGAATCGTCACAGTGACGAAGCAGGTC 17835
Query 38814 AACTACCTGCAGGAATACATCAGGACGCAATGC 38846
||| |||||| | ||||| || || || |||
Sbjct 17834 GGCTATCTGCAGAACTACATAAGCACTCAGTGC 17802
>seq813
Length=55966
Score = 87.8 bits (96), Expect = 5e-13
Identities = 171/248 (69%), Gaps = 6/248 (2%)
Strand=Plus/Plus
Query 25545 CCCTCGAAATAAACCTGATCACCTTTTTTCACATACTGCCCTACGACTTCAGCAAGTTTC 25604
|| |||| ||| |||||| |||||| || ||||| || | ||||| || |||||
Sbjct 13539 CCTTCGATATAGACCTGAGAACCTTTACGCAGATACTCACCGGCAACTTCTGCCAGTTTG 13598
Query 25605 CCAACTACGGCAACACGA--TGCCATTCAGTCTGCTCCTTTTGTTCGCCAGTCTGTTTAT 25662
|||| || ||| |||| ||||||||||||||||| || || || ||| |||||
Sbjct 13599 CCAA--ACAGCACCACGCGGTGCCATTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTAT 13656
Query 25663 CTCGCCACTGCTCTGATGTAGCGACTGTCAGGTTAGCGAACGCCGTC-CCTGATGGTGAA 25721
| ||||| || || ||||| | || | ||| || ||| || | || ||
Sbjct 13657 CACGCCAGGATTCGGAAGTAGCCAGCGTAATGTTGGC-AACTGCGCCACCACTCGGCATG 13715
Query 25722 TAACGAACCTCCGGGTCTTGCCCGACCCGGCCTAAGATGATCACCTTATTTACGCCTCTA 25781
|| || || |||||||| || || | || | || |||||||| |||||||||||
Sbjct 13716 TAGCGTACTTCCGGGTCCTGGCCCAGATTACCGACGAGAATCACCTTGTTTACGCCTCTG 13775
Query 25782 CTAGCCAT 25789
|| |||||
Sbjct 13776 CTGGCCAT 13783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130995609242836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |