Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_013059.1 Length=40975 Score E Sequences producing significant alignments: (Bits) Value seq997 145 2e-30 seq813 87.8 5e-13 >seq997 Length=29618 Score = 145 bits (160), Expect = 2e-30 Identities = 301/453 (66%), Gaps = 24/453 (5%) Strand=Plus/Minus Query 38418 ATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 38477 |||||| || |||||||||| |||| |||| | ||||||||| | | |||| || | Sbjct 18254 ATGAGCTGATTAACCGCGATCATCTGCGCTGTCGTTATCTGCCTGCTGGTCTTTATGGCT 18195 Query 38478 TGGGCTGTTAATCATTACCGTGATAACGCCACCGCCTACAAAGAGCAGCGCGATAAAGCC 38537 ||||| |||| || || || || ||||||| | |||||||||||||||||||||||||| Sbjct 18194 TGGGCGATTAACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCC 18135 Query 38538 AC---------------------ATCCATCATCGCTGATATGCAGAAGCGTCAACGTGAT 38576 || ||| |||| || ||||||| || || |||||| Sbjct 18134 ACTGAGAAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGAT 18075 Query 38577 GTAGCAGAACTCGACGCCAGATACACAAAGGAGCTTGCTGATGCTAACGCGACTATCGAA 38636 | || | || || |||| |||||| || | |||||||| || | | || || Sbjct 18074 GCCGCTGCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAG 18015 Query 38637 AGTCTCCGTGCTGATGTTTCTGCTGGTCGTAAGCGCCTGCAAGTCGCCGCCACCTGT--- 38693 |||| | | ||||| |||||| |||||||| ||||| || ||| | |||| Sbjct 18014 CGTCTGCATAGCGATGTCATTGCTGGCCGTAAGCGGCTGCAGCTCAACGCAAACTGTCCC 17955 Query 38694 GCAAAGTCAACGACCGAAGCCAGCGGCATGGGCAATGGAGAAAGCCCAAGACTTACAGCA 38753 || || | |||||| || ||||||||||| ||| |||| |||||||| | Sbjct 17954 GCGAACGGAGCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGAC 17895 Query 38754 GATGCTGAACTCAATTATTACCGTCTACGAAGTGGAATCGACAGGATAACCGCGCAGGTT 38813 ||||||| |||||| | || ||| |||||| || | || |||||| Sbjct 17894 TCCGCTGAACGGGATTATTTCATCCTCAGAAAGCGAATCGTCACAGTGACGAAGCAGGTC 17835 Query 38814 AACTACCTGCAGGAATACATCAGGACGCAATGC 38846 ||| |||||| | ||||| || || || ||| Sbjct 17834 GGCTATCTGCAGAACTACATAAGCACTCAGTGC 17802 >seq813 Length=55966 Score = 87.8 bits (96), Expect = 5e-13 Identities = 171/248 (69%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 25545 CCCTCGAAATAAACCTGATCACCTTTTTTCACATACTGCCCTACGACTTCAGCAAGTTTC 25604 || |||| ||| |||||| |||||| || ||||| || | ||||| || ||||| Sbjct 13539 CCTTCGATATAGACCTGAGAACCTTTACGCAGATACTCACCGGCAACTTCTGCCAGTTTG 13598 Query 25605 CCAACTACGGCAACACGA--TGCCATTCAGTCTGCTCCTTTTGTTCGCCAGTCTGTTTAT 25662 |||| || ||| |||| ||||||||||||||||| || || || ||| ||||| Sbjct 13599 CCAA--ACAGCACCACGCGGTGCCATTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTAT 13656 Query 25663 CTCGCCACTGCTCTGATGTAGCGACTGTCAGGTTAGCGAACGCCGTC-CCTGATGGTGAA 25721 | ||||| || || ||||| | || | ||| || ||| || | || || Sbjct 13657 CACGCCAGGATTCGGAAGTAGCCAGCGTAATGTTGGC-AACTGCGCCACCACTCGGCATG 13715 Query 25722 TAACGAACCTCCGGGTCTTGCCCGACCCGGCCTAAGATGATCACCTTATTTACGCCTCTA 25781 || || || |||||||| || || | || | || |||||||| ||||||||||| Sbjct 13716 TAGCGTACTTCCGGGTCCTGGCCCAGATTACCGACGAGAATCACCTTGTTTACGCCTCTG 13775 Query 25782 CTAGCCAT 25789 || ||||| Sbjct 13776 CTGGCCAT 13783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130995609242836