Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq486 120 4e-22
>seq486
Length=217039
Score = 120 bits (132), Expect = 4e-22
Identities = 257/381 (67%), Gaps = 5/381 (1%)
Strand=Plus/Plus
Query 116235 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294
||| | ||| |||| || ||||||||||| || | ||| || || || || ||||| ||
Sbjct 175475 CAATACAAAAGCATCGGCCAGACCTTGGACGCCAATGCCGATAGGTCGGTGCCTCATGTT 175534
Query 116295 AGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 116353
||||||| || ||| |||||||| |||| |||||||| | | || || || |
Sbjct 175535 AGACTTTTTCGCT-TCTGGGACGGGATAGTAATTAACATCGATAATCTTGTTCAGGTTCT 175593
Query 116354 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 116413
|| | | || || | || | || || || ||||| | | | | |||
Sbjct 175594 CAGTTATGATTTTGGTCACTTGTTTTAGTTTCTCAAAATCATATGTTTTATT---TTCGG 175650
Query 116414 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 116473
| ||| || | | || |||||||||| || || |||| ||||| | |
Sbjct 175651 TTACAAACATGTTGACAGCAATTGACGCCAAGTTGCAAACAGCTACTTCATCAGCAGATG 175710
Query 116474 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 116533
||||||| | ||| ||||| || | ||| | || ||||| ||||| ||||||||||
Sbjct 175711 TGTACTCAACAATCTCCGTGCATAGATTGCTGCATTTGATGGTTCCCAAATTCTTTTGAT 175770
Query 116534 TTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGG 116593
| |||| |||| || ||||| ||||| ||||| ||||| || || ||||| ||| |
Sbjct 175771 TGCTCTTTCTGTTGCATGCATCTTTGTAAAGCATGTATGGAGTTCCAGTCTCTACTTGTG 175830
Query 116594 ACTTGAGAATAGCCTTCCATA 116614
|| | ||||||||||||||
Sbjct 175831 CCTCAATAATAGCCTTCCATA 175851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613493442101040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |