Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_013693.1 Length=158006 Score E Sequences producing significant alignments: (Bits) Value seq974 167 2e-36 >seq974 Length=31311 Score = 167 bits (184), Expect = 2e-36 Identities = 224/312 (72%), Gaps = 0/312 (0%) Strand=Plus/Plus Query 53755 TGCCACAGAGGGATGTACGCTGTCGCCGCACCACCACGAATGCCGCCCTGGGAGCAAGAC 53814 ||||||| |||| | || ||||| ||||| || || | ||||||||| ||||| || Sbjct 49 TGCCACATAGGGTAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGAT 108 Query 53815 TTGAGCGCCCCAGTGAGATACTTGATGAATGGGATCAGGCCTGTGTGAACCATCTCTCCG 53874 || | |||| || | ||| ||| ||||| ||| ||||| | || ||| Sbjct 109 TTTACCGCCGTCTGGAAGTGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCG 168 Query 53875 CCGCGAATAGGACTGCCAATCCCACGGATAGCCCCGACGTCAAAGCCGATACCCGCACGT 53934 |||||||| || ||||| | | ||||||| ||| ||| | ||||||||| ||||| Sbjct 169 CCGCGAATCGGGCTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGC 228 Query 53935 TTGGACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCA 53994 | ||| || || | ||||||| ||| ||| |||||||| || |||||| |||||||| Sbjct 229 TGGGAAACGTATTTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCA 288 Query 53995 GTTTTGATCAGGACACAGGAACTGAACTGACGGGTAGGAGTACGAACACCTGCCATAATC 54054 | |||||| || ||||| |||||||||||||| || || || || || | ||| || Sbjct 289 CACTCGATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATT 348 Query 54055 GGGGTGGGAAGA 54066 || || || ||| Sbjct 349 GGCGTAGGCAGA 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505479864359840