Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_014036.1
Length=174436
Score E
Sequences producing significant alignments: (Bits) Value
seq236 187 3e-42
seq637 140 4e-28
seq962 131 2e-25
>seq236
Length=545527
Score = 187 bits (206), Expect = 3e-42
Identities = 153/186 (82%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 51218 GTGGAAGGTGGACAGCATTTAAACGTAAACGTGTTGCGCCGCGAAACTCTCCTGGATGCG 51277
||||||||||| ||||| | ||||||||||| ||||||||||||| || |||| |||
Sbjct 30710 GTGGAAGGTGGTCAGCACCTTAACGTAAACGTACTGCGCCGCGAAACGCTGATGGACGCG 30769
Query 51278 GTTGAACATCCTGAAAAATACCCACAGTTAACGATCCGTGTTTCTGGTTATGCAGTGCGT 51337
||||| || || ||||||||||| ||| | || || || || ||||||||||| || ||
Sbjct 30770 GTTGAGCACCCAGAAAAATACCCGCAGCTGACCATTCGCGTGTCTGGTTATGCGGTACGC 30829
Query 51338 TTTAACTCACTGACCCCTGAACAGCAACGCGACGTTATCGCCCGAACCTTTACAGAGAGT 51397
|| ||||| |||||||| |||||||| |||||||||||||| || |||||||| || ||
Sbjct 30830 TTCAACTCTCTGACCCCAGAACAGCAGCGCGACGTTATCGCGCGTACCTTTACTGAAAGC 30889
Query 51398 CTATAA 51403
|| |||
Sbjct 30890 CTGTAA 30895
>seq637
Length=122170
Score = 140 bits (154), Expect = 4e-28
Identities = 159/212 (75%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 51221 GAAGGTGGACAGCATTTAAACGTAAACGTGTTGCGCCGCGAAACTCTCCTGGATGCGGTT 51280
|||||||| ||||| | ||||| ||||| || ||| |||| || || |||||| |
Sbjct 107288 GAAGGTGGTCAGCACCTGAACGTGAACGTAATGAACCGTGAAATGCTGCTCGATGCGATG 107229
Query 51281 GAACATCCTGAAAAATACCCACAGTTAACGATCCGTGTTTCTGGTTATGCAGTGCGTTTT 51340
||||||||||| ||||| || ||| | || |||||||| ||||| || ||||| ||||||
Sbjct 107228 GAACATCCTGAGAAATATCCTCAGCTGACCATCCGTGTATCTGGCTACGCAGTACGTTTT 107169
Query 51341 AACTCACTGACCCCTGAACAGCAACGCGACGTTATCGCCCGAACCTTTACAGAGAGTCTA 51400
||||| ||||| |||||||| | ||||||||| |||| || || || || |
Sbjct 107168 AACTCCCTGACTAAAGAACAGCAGCAGGACGTTATCACCCGTACTTTCACTCAGTCCATG 107109
Query 51401 TAATGGCAATTGA-TGATATCAAGGGTTATAA 51431
||| | |||||| ||| |||| | |||| ||
Sbjct 107108 TAAGTGGAATTGACTGAAATCACGCGTTAAAA 107077
>seq962
Length=32987
Score = 131 bits (144), Expect = 2e-25
Identities = 753/1186 (63%), Gaps = 53/1186 (4%)
Strand=Plus/Minus
Query 153029 CAACGAAAACGCAAACAAAGATTCTCGCGTATTCCCGACTAAACGCGATCTTCTGGCTGG 153088
||| |||||||| |||||||| | || |||| || | |||||||| ||||| ||
Sbjct 25741 CAATGAAAACGCCAACAAAGACAGTAAAGTGATCCCCACCCAGCGCGATCTGCTGGCCGG 25682
Query 153089 TATCGTTTCTAAACA-TATGGCGCGTAACCATATTCTACCGAAACATATTGTTGCGGCGC 153147
|||||| | ||||| |||| | ||| | || | || ||| || | || | ||||
Sbjct 25681 TATCGTCGCCAAACACTATGCC-CGTCAGCACCTGCTGCCGCGCGATGTGGTCTCAGCGC 25623
Query 153148 ATGATTCCGGTGATATTCATTATCACGATCTGGATTACAGCCCTTTCACCCC-ATACACT 153206
| || |||||| || || ||||||||||| || || || ||| ||| || |
Sbjct 25622 ACGAGCGCGGTGAGATCCACTATCACGATCTCGACTATTCACCGTTCTTCCCGATGTTC- 25564
Query 153207 AACTGCTGTCTTGTTGACCTGAAAGGCATGTTAGAAAACGGGTTCCGTATGGGTAACGCT 153266
||||| || ||||||||||||||||| | ||||||| |||||||||||
Sbjct 25563 AACTGTATGCTGATTGACCTGAAAGGCATGCTGACCCACGGGTTTAAAATGGGTAACGCC 25504
Query 153267 GATATCGAACCGCCTAAATCAATCGGTGTTGCTACTGCTCTTATGGCTCAGATCACCGCA 153326
|| || |||||||| ||||| ||| || ||||| | | ||| ||||| | |||
Sbjct 25503 GAGATTGAACCGCCAAAATCCATCTCCACCGCCACTGCGGTCACGGCACAGATTATCGCC 25444
Query 153327 CAGATTGCTTCTCACCAGTACGGCGGGACAACCTTTGCAAATG--TCGATCAGGTGCTGG 153384
||| | || ||| |||||||| || ||| || || | | || | |||||||
Sbjct 25443 CAGGTCGCCAGCCACATTTACGGCGGCACCACCATT--AACCGCATTGACGAAGTGCTGG 25386
Query 153385 CCCCTTACGTTGAAATGACG-TACAACAAACACTTTAAAGATGCTGTTTGGTACGGGGTT 153443
|||| | | ||| | | | |||||| ||| ||| || | || | |
Sbjct 25385 CCCCGTTTG-TGACCGCAAGCTTCAACAAGCACCGCAAAACGGCCGAAGAGTGGCAGATC 25327
Query 153444 CCTAAATCAAAACAGTATGCG--ATGGAAAAAACAGAAAAGGATGTATTCGATGCGTTCC 153501
|| | | | |||||| | | | ||||| | ||| || |||||||
Sbjct 25326 CCGGACGCCGACGGCTATGCGCACTCGCGCACTGAGAAAGAGTGCTAT--GACGCGTTCC 25269
Query 153502 AGTCATACGAATATGAAGTAAACACCTTACATACTGCAAATGGACAGACGCCTTTTGTCA 153561
|||| || ||||| || || ||| | ||||| || || || |||||||| ||||| |
Sbjct 25268 AGTCGCTGGAGTATGAGGTGAATACCCTGCATACCGCCAACGGCCAGACGCCGTTTGTGA 25209
Query 153562 CGATCACTTTCGGTATGGGTACTGGTTGGCGCGAA---CGCATGATCCAGAAAGCAATTC 153618
| || ||| || |||| || | ||| ||| || |||||||| | | || |
Sbjct 25208 CCTTCGGTTTTGGCCTGGGCACCAGCTGG---GAATCGCGTTTGATCCAGCAGTCCATCC 25152
Query 153619 TGAAAAACCGTATTCGTGGACTGGGTAAAAAAGGCATTACTCCTGTATTCCCAAAACTGG 153678
|| |||||||| || || ||||| || ||| || | || ||||| |||||||
Sbjct 25151 TGCGCAACCGTATCTCCGGCCTCGGTAAGAACCGCAAAACGGCGGTGTTCCCGAAACTGG 25092
Query 153679 TTATGTTTATGGAAAAAGGGATTAACCTTAATCCGGAAGACAGAAACTATGATATTAAGA 153738
| | || | ||| | |||| || | || || || || || ||
Sbjct 25091 TATTCGCCATCCGCGACGGGCTGAACCACAAAGTTGGCGATCCGAATTACGACATCAAAC 25032
Query 153739 AATTGGCCCTGGAATGTTCTTCAAAGCGTATGTATCCGGATATTATTAGCGCGGCTAATA 153798
| |||| ||||| || | ||||| ||||| ||||||||| | | | | | |
Sbjct 25031 AGCTGGCGCTGGAGTGCGCGAGCAAGCGCATGTACCCGGATATTCTGAACTACGATCA-- 24974
Query 153799 ACCGTCGTA----TTACTGGCTCTAGCATTCCTGTATCTCCTATGGGTTGTCGTAGTTTC 153854
|||||| | || || | |||| | | | || |||||||| || || |||
Sbjct 24973 --GGTCGTAAAAGTAACCGGGT----CATT--TAAAACGCCAATGGGTTGCCGCAGCTTC 24922
Query 153855 CTTAGCGTGTGGAATGATGAGCACGGTAATGAAATTCTTGATGGACGTAATAACCTGGGC 153914
|| |||| | | ||||| |||| | | || | || || ||||| ||||| |||
Sbjct 24921 CTCGGCGTATACGAAGATGAAAACGGCGAGCAGATCCACGACGGGCGTAACAACCTCGGC 24862
Query 153915 GTTGTGACAATCAACCTTCCTCGTATTGCGATTGAAGCCGAAGCACAGGAAGATGAAGAC 153974
|| | | | ||||| || || || ||| | || ||| ||| || |||||
Sbjct 24861 GTCATCAGCCTGAACCTGCCGCGCATCGCGCTGGAGGCCAAAG-GCA-----ATGAA--- 24811
Query 153975 GCGCATGATGCATTTTGGCGTATCCTTGATGAACGTCTGGAACTGTGCTTTGAA-GCCCT 154033
| || ||| ||| | || |||||||| ||| | ||| || || || ||
Sbjct 24810 ------GCTGAATTCTGGACACTGCTGGATGAACGCCTGCAGCTG-GCGCGCAAGGCGCT 24758
Query 154034 GATGACTCGTATCGATAGCCTACGCGGTGTTAAAGCCAGTGTAGCCCCGATCCTTTATAC 154093
|||||| ||||||| |||| || || |||||| | || || || ||||| ||||
Sbjct 24757 GATGACCCGTATCGCCCGCCTTGAAGGGGTAAAAGCCCGCGTGGCGCCTATCCTCTATAT 24698
Query 154094 AGAAGGTGCGTTTGGTGTAAGGTTGAAACCCGATGATGAAAT-TCTGGAACTGTTCAAAA 154152
||||| || | || || | ||||| | || ||||| | ||| || | |||||||
Sbjct 24697 GGAAGGGGCCTGCGGCGTGCGCCTGAAAGCGGACGATGACGTCTCT-GAGATCTTCAAAA 24639
Query 154153 ATGGACGCAGTTCTATCAGTCTGGGATACATCGGATTGCATGAAAC 154198
| || ||| || || ||||| || ||||| | ||||||||
Sbjct 24638 ACGGCCGCGCGTCGATTTCGCTGGGCTATATCGGCATCCATGAAAC 24593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 558054685343040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |