Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_014467.1
Length=176788
Score E
Sequences producing significant alignments: (Bits) Value
seq962 235 6e-57
seq974 230 3e-55
seq236 168 8e-37
>seq962
Length=32987
Score = 235 bits (260), Expect = 6e-57
Identities = 1080/1695 (64%), Gaps = 65/1695 (4%)
Strand=Plus/Minus
Query 154690 GCCCGTGCATACATCGAATATCGCCACGATCGCGATATTGCCCGTGAACAGAAAAGTAAG 154749
||||| || ||||| || || ||||||||||| || | |||||| || ||
Sbjct 25851 GCCCGCGCCTACATTGAGTACCGCCACGATCGTGACGTGCAGCGTGAAAAGCGCGGTCGC 25792
Query 154750 CTGTTCAAAGATATCTCCGGCATGGTGAATCTGTCCAACAAAGAGATCACCAACGAGAAC 154809
||| | | || ||| ||| |||| | | | ||||| | | ||| || |||
Sbjct 25791 CTGAACCAGGAGATCCGTGGCCTGGTAGAGCAGACCAACTCTGCCCTGCTCAATGAAAAC 25732
Query 154810 GCAAACAAAGACGCACGGGTATTCCCTACACAGCGTGATTTGCTGGCGGGTATTGTAGCG 154869
|| ||||||||| || |||| || ||||| ||| ||||||| ||||| || ||
Sbjct 25731 GCCAACAAAGACAGTAAAGTGATCCCCACCCAGCGCGATCTGCTGGCCGGTATCGTCGCC 25672
Query 154870 AAGCATTTCGCCCGTAATCATATCCTTCCGAAACATATCGTAGAAGCGCATGACTCCGGC 154929
|| || | |||||| | || | || ||| || | || |||||| || |||
Sbjct 25671 AAACACTATGCCCGTCAGCACCTGCTGCCGCGCGATGTGGTCTCAGCGCACGAGCGCGGT 25612
Query 154930 GACATCCATTATCACGATCTGGACTATAGCCCGTTCACCCCTTACACTAACTGCTGTCTG 154989
|| ||||| ||||||||||| |||||| |||||| ||| ||||| |||
Sbjct 25611 GAGATCCACTATCACGATCTCGACTATTCACCGTTCTTCCCGATGTTCAACTGTATGCTG 25552
Query 154990 GTTGACCTGAAAGGTATGCTTGAGAACGGTTTCAAGATGGGTAACGCGGACATTGAACCG 155049
||||||||||||| ||||| |||| || || ||||||||||| || |||||||||
Sbjct 25551 ATTGACCTGAAAGGCATGCTGACCCACGGGTTTAAAATGGGTAACGCCGAGATTGAACCG 25492
Query 155050 CCTAAATCGATCGGTGTTGCTACCGCTCTCATGGCGCAGATCACCGCACAGATTGCCTCT 155109
|| ||||| ||| || || || ||| ||| ||||| | ||| ||| | |||
Sbjct 25491 CCAAAATCCATCTCCACCGCCACTGCGGTCACGGCACAGATTATCGCCCAGGTCGCCAGC 25432
Query 155110 CACCAGTACGGCGGGACAACCTTTGCGAACGTTGATAAAGTGCTGGCTCCATACGTAGAA 155169
||| |||||||| || ||| || | |||| |||||||||| || | | |
Sbjct 25431 CACATTTACGGCGGCACCACCATTAACCGCATTGACGAAGTGCTGGCCCCGT---TTGTG 25375
Query 155170 ATGACATTCTTCAAACATCTGCGCGA---TGCTGAACATTATGGTATCGAACACTATAAC 155226
| || |||||| | | ||| | || ||| | | ||| || ||
Sbjct 25374 ACCGCAAGCTTCAACAAGCACCGCAAAACGGCCGAAGAGTGGCAGATCCCGGACGCCGAC 25315
Query 155227 GATTATGTGTATGCAATCGAGAAGACCGAAAAAGA-TG-TATTCGATGCGTTCCAGTCCT 155284
| |||| ||| ||| | || || ||||| || ||| || |||||||||||
Sbjct 25314 GGCTATG----CGCACTCGCG--CACTGAGAAAGAGTGCTAT--GACGCGTTCCAGTCGC 25263
Query 155285 ATGAGTATGAAGTGAATACCCTGCATACTGCCAACGGGCAAACCCCGTTTGTTACCATCA 155344
|||||||| ||||||||||||||||| |||||||| || || |||||||| ||| ||
Sbjct 25262 TGGAGTATGAGGTGAATACCCTGCATACCGCCAACGGCCAGACGCCGTTTGTGACCTTCG 25203
Query 155345 CTTTCGGTACTGGTACAAGCGACTATGAA---CGCATGATCCAGAAAGCGATTCTGAAAA 155401
||| || || || || || ||| || |||||||| | | || ||| |
Sbjct 25202 GTTTTGGCCTGGGCACCAG---CTGGGAATCGCGTTTGATCCAGCAGTCCATCCTGCGCA 25146
Query 155402 ATCGTATTCGCGGCCTGGGTAAAGAGGGTATCACTCCGGTATTCCCTAAACTGGTTATGT 155461
| ||||| |||||| ||||| | | | || |||| ||||| |||||||| |
Sbjct 25145 ACCGTATCTCCGGCCTCGGTAAGAACCGCAAAACGGCGGTGTTCCCGAAACTGGTATTCG 25086
Query 155462 TCATGGAAAAAGGAATCAACCTTGATCCAGAGGATCAGAACTATGACATCAAACAACTTG 155521
||| | || | |||| | | |||| ||| || ||||||||||| || |
Sbjct 25085 CCATCCGCGACGGGCTGAACCACAAAGTTGGCGATCCGAATTACGACATCAAACAGCTGG 25026
Query 155522 CCCTTGAATGTGCTTCGAAACGCATGTACCCAGATATCATTA-----GTTCAGCTAATAA 155576
| || || || || || ||||||||||| ||||| | | | |||| | |||
Sbjct 25025 CGCTGGAGTGCGCGAGCAAGCGCATGTACCCGGATATTCTGAACTACGATCAGGTCGTAA 24966
Query 155577 CCGCGCTATTACTGGTTCTAGCGTTCCTGTATCTCCTATGGGTTGTCGCAGTTTCCTTAG 155636
| | || || | | || | | | || |||||||| ||||| ||||| |
Sbjct 24965 AAG-----TAACCGGGT----CATT--TAAAACGCCAATGGGTTGCCGCAGCTTCCTCGG 24917
Query 155637 CGTGTGGCATGATGATAACGGTAATGAAATTCTGGATGGACGTAATAATCTGGGTGTGGT 155696
||| | | ||||| ||||| | | || | || || ||||| || || || || |
Sbjct 24916 CGTATACGAAGATGAAAACGGCGAGCAGATCCACGACGGGCGTAACAACCTCGGCGTCAT 24857
Query 155697 GACAATCAACCTCCCACGTATTGCGATCGAAGCCGAAGCACAGGAAGAAGAAGACGCACA 155756
| | ||||| || || || ||| | || ||| ||| | |||
Sbjct 24856 CAGCCTGAACCTGCCGCGCATCGCGCTGGAGGCCAAAGGCAATGAA-------------- 24811
Query 155757 CGATGCATTTTGGCGTATCCTTGATGAACGTCTGGATCTTTGTTACGATGCTCTGATGAC 155816
| || ||| ||| | || |||||||| ||| | || | | || ||||||||
Sbjct 24810 -GCTGAATTCTGGACACTGCTGGATGAACGCCTGCAGCTGGCGCGCAAGGCGCTGATGAC 24752
Query 155817 TCGTATCGAAAGCCTACGCGGTGTTAAAGCCAGTGTAGCCCCGATCCTGTACACAGAAGG 155876
||||||| |||| || || |||||| | || || || ||||| || | |||||
Sbjct 24751 CCGTATCGCCCGCCTTGAAGGGGTAAAAGCCCGCGTGGCGCCTATCCTCTATATGGAAGG 24692
Query 155877 TGCGTTTGGTGTACGCCTGAAACCGGATGATGAAAT-TCTGGAACTGTTCAAAAATGGGC 155935
|| | || || ||||||||| |||| ||||| | ||| || | |||||||| || |
Sbjct 24691 GGCCTGCGGCGTGCGCCTGAAAGCGGACGATGACGTCTCT-GAGATCTTCAAAAACGGCC 24633
Query 155936 GTAGTTCTATCAGTCTGGGCTATATCGGGCTGCATGAAACGCTGTTGATG-TTTGGCT-C 155993
| || || |||||||||||||| | ||||||| | || ||| || ||
Sbjct 24632 GCGCGTCGATTTCGCTGGGCTATATCGGCATCCATGAAA--CCATTAATGCCCTGTCTGG 24575
Query 155994 CGGTCAACATCCATTCGATCGCGTTG-GCTCCCAGAACTTCG-GTAAACACGTTCTGGAA 156051
||| ||| | || ||| | ||| | ||| | || | || | |
Sbjct 24574 CGGCACGCATATGTATGACAGCGACGCGCTACGTGAAAAAGGCGTGGCGA--TTGTTCAG 24517
Query 156052 CACCTGAAAAACAAAACTGAACGCTGGAAAGCCGAAACTGGGTATGGATTCAGTCTGTAT 156111
| |||| | || | ||||||| ||||| || || || ||||| |||||
Sbjct 24516 CGCCTGCGCGATGCCGTGGACCAGTGGAAAGAGGAAACCGGCTACGGTTTCAGCCTGTAC 24457
Query 156112 TCAACCCC-AGCGGAATCTCTCTGCCATCGCTTCTGTAAGCTGGACTTTGAGAAGTTCGG 156170
||||| |||| | | || ||| | |||||||| |||||| | |||||||
Sbjct 24456 AGTACCCCAAGCGAGAAC-CTGTGCGACCGCTTCTGCCGTCTGGACACCGCCGAGTTCGG 24398
Query 156171 AAGCATCAAAGGGGTCACGGATAAAGGCTGGTATACAAACAGTTTCCATCTGGACGTTGA 156230
| | | |||| || || |||||||| | || || ||||| ||||| || ||||| ||
Sbjct 24397 CATCGTGGAAGGCGTGACCGATAAAGGTTACTACACCAACAGCTTCCACCTCGACGTGGA 24338
Query 156231 CCGCAAGGTAACACCGTTCGAGAAAATCGACTATGAAGCCGATTATCATTACATCGCTAC 156290
||||||| |||| ||| || ||||||| |||||| | |||| ||||| |
Sbjct 24337 GAAGAAGGTAAACCCGTACGACAAGATCGACTTTGAAGCGGCGTATCCGCCGATCGCCAA 24278
Query 156291 TGCTGGTCATATCAGTTATGTTGAATTCCCTGATATGAAAAACAACCTGCAAGCCCTGGA 156350
| || ||| | || | || | ||| | || | |||||||| | || |||||
Sbjct 24277 CGGCGGCTTCATCTGCTACGGCGAGTACCCGAACATTCAGCACAACCTGAAGGCGCTGGA 24218
Query 156351 AAAAGTCTGGGATTA 156365
| | || ||||||||
Sbjct 24217 AGACGTGTGGGATTA 24203
>seq974
Length=31311
Score = 230 bits (254), Expect = 3e-55
Identities = 267/359 (74%), Gaps = 6/359 (2%)
Strand=Plus/Minus
Query 41146 CCTACGCCTATTATGGCGGGTGTGCGTACTCCTACGCGTCAGTTCTCCAGTTGTGTTGTA 41205
|||||||| || ||| | || ||||| || || || ||||||||| | || || |
Sbjct 356 CCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGTACTG 297
Query 41206 ATCGAATCTGGTGATTCTCTGGGTTCTCTGAACGCTGTTACGTCC---GCGATCGTGAAA 41262
||||| | |||||| |||| ||| | ||||| |||||| || |||||||||
Sbjct 296 ATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCC---ACGTCCAGCGCCATCGTGAAA 240
Query 41263 TATATCTCTCAACGTGCGGGTATCGGTGTCAACGCCGGACACATTCGCGCTATGGGTTCA 41322
|| | || || ||||| |||||||| |||||||||| | ||| || || ||||
Sbjct 239 TACGTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTGGGCAGC 180
Query 41323 AAAATCCGTGGTGGTGAAGCAGTCCATACAGGCGTTATCCCGTTCTGGAAACACATTCAG 41382
|| || || ||||||||| |||| || ||| ||||||||||| || ||| | |||
Sbjct 179 CCGATTCGCGGCGGTGAAGCATTCCACACCGGCTGTATCCCGTTCTATAAGCACTTCCAG 120
Query 41383 ACGGCGGTTAAATCTTGTTCCCAGGGTGGCGTTCGTGGTGGTGCAGCAACCCTGTATTAT 41442
|||||||| ||||| || || ||||| ||||| || || ||||| || ||||||| ||
Sbjct 119 ACGGCGGTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGACCCTGTTCTAC 60
Query 41443 CCGATCTGGCATCTTGAAGTTGAAAACCTGCTGGTTCTGAAAAATAACCGTGGCGTTGA 41501
|| || ||||| || ||||| |||| ||||||||| |||||||| |||||||| |||||
Sbjct 59 CCTATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTCCTGAAAAACAACCGTGGTGTTGA 1
>seq236
Length=545527
Score = 168 bits (186), Expect = 8e-37
Identities = 149/186 (80%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 51304 GTGGAAGGTGGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCT 51363
||||||||||| || ||| | ||||||||||| ||||||||||||| ||| || ||
Sbjct 30710 GTGGAAGGTGGTCAGCACCTTAACGTAAACGTACTGCGCCGCGAAACGCTGATGGACGCG 30769
Query 51364 GTGAAGCATCCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGT 51423
|| |||| |||||||||||||| ||| | || || || ||||| || ||||| || ||
Sbjct 30770 GTTGAGCACCCAGAAAAATACCCGCAGCTGACCATTCGCGTGTCTGGTTATGCGGTACGC 30829
Query 51424 TTCAATTCACTGACTCCTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACAGAGAGT 51483
||||| || ||||| || ||||| ||||||||||||||||| || |||||||| || ||
Sbjct 30830 TTCAACTCTCTGACCCCAGAACAGCAGCGCGACGTTATCGCGCGTACCTTTACTGAAAGC 30889
Query 51484 CTATAA 51489
|| |||
Sbjct 30890 CTGTAA 30895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565580916563520
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