Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_014635.1 Length=163875 Score E Sequences producing significant alignments: (Bits) Value seq962 86.0 7e-12 seq955 86.0 7e-12 seq952 86.0 7e-12 >seq962 Length=32987 Score = 86.0 bits (94), Expect = 7e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 132908 GGAACAAACACACCTGTTGATAAATGCTACGAATGCGGTTTTGACGGTGAATTCAAATGC 132967 || || ||||| || | || |||||||||| ||||| ||| ||| || ||| | || Sbjct 24177 GGCACCAACACGCCCATCGACGAATGCTACGAGTGCGGCTTTACCGGCGAGTTCGAGTGT 24118 Query 132968 ACCTCGAAAGGATTTAGTTGCCCGAGCTGCGGTAACCACGACTCGGCAAAGATGTCAGTT 133027 ||| ||||| |||| ||||||| ||||||||||||||| ||||| |||| || Sbjct 24117 ACCAGCAAAGGCTTTACCTGCCCGAAATGCGGTAACCACGACGCGGCACGCGTGTCGGTA 24058 Query 133028 ATCCGAAGAGTTTGTGGGTATCTTGGT 133054 | ||| | || || || ||||| ||| Sbjct 24057 ACCCGCCGCGTGTGCGGCTATCTCGGT 24031 >seq955 Length=33606 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 106690 CTTAGCTCAGTTGGATAGAGCAGCGGCCTTCTAAGCCGCGGGTCATTGGTTCAAATCCAA 106749 |||||||||||||||||||||| ||||||||||||||| |||| | ||||| ||||| | Sbjct 1499 CTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGAATCCTA 1440 Query 106750 TAGGGACTGCCA 106761 |||| ||||| Sbjct 1439 CAGGGCGTGCCA 1428 >seq952 Length=33737 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 106690 CTTAGCTCAGTTGGATAGAGCAGCGGCCTTCTAAGCCGCGGGTCATTGGTTCAAATCCAA 106749 |||||||||||||||||||||| ||||||||||||||| |||| | ||||| ||||| | Sbjct 12138 CTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCGTAGGTTCGAATCCTA 12079 Query 106750 TAGGGACTGCCA 106761 |||| ||||| Sbjct 12078 CAGGGCGTGCCA 12067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524260243200400