Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_014636.1
Length=225268
Score E
Sequences producing significant alignments: (Bits) Value
seq962 203 5e-47
seq974 170 3e-37
>seq962
Length=32987
Score = 203 bits (224), Expect = 5e-47
Identities = 819/1275 (64%), Gaps = 35/1275 (3%)
Strand=Plus/Plus
Query 123848 TTCATGCAATCCAATATAGCCAATGCTAACAGATGCGCGACCATTTTCAAATGCTTTCAT 123907
|||||| | || |||||||| | || || ||||| || |||| || | | |||
Sbjct 24595 TTCATGGATGCCGATATAGCCCAGCGAAATCGACGCGCGGCCGTTTTTGAA-GATCTCAG 24653
Query 123908 -GATGTCATCATTTGGTTTCAGACGAACACCACAAGCACCTTCAACATAAAGAATCGGAG 123966
|| |||||| | | |||||| || || || || || ||||| | ||| || || || |
Sbjct 24654 AGACGTCATCGTCCGCTTTCAGGCGCACGCCGCAGGCCCCTTCCATATAGAGGATAGGCG 24713
Query 123967 CAACGCTTGCCTTGACACCACGCAGACGATCAACGCGAGTCAACAAAGCTTTCTTAACGA 124026
| |||| || || || || || || | | || |||| || || || | |
Sbjct 24714 CCACGCGGGCTTTTACCCCTTCAAGGCGGGCGATACGGGTCATCAGCGCCTTGCGCGCCA 24773
Query 124027 TTTCCATACGCTCTTCCAGAATTTCAAAGAAGCGCATTTGATTGCCGTTTGCGTCGAGTG 124086
| || || || ||||| | | |||| || |||||| || || || || |
Sbjct 24774 GCTGCAGGCGTTCATCCAGCAGTGTCCAGAATTCAGCTTCATTGCCTTTGGCCTCCAGCG 24833
Query 124087 CGATACGCGGCAAGTTCAGAGTAACAACACCGAGATTGTTTCTGCCTTCATGAACTTCAT 124146
|||| ||||||| |||||| | | || ||||| ||||| | || || || | | |
Sbjct 24834 CGATGCGCGGCAGGTTCAGGCTGATGACGCCGAGGTTGTTACGCCCGTCGTGGATCTGCT 24893
Query 124147 TACCGGTTTCGTCTTCCCAG-CGATGCAAGAAACTACGGCATCCCATAGGGAACTTAAAG 124205
||| |||| ||||| | || | | ||| || ||||| ||||| || |||||
Sbjct 24894 CGCCGTTTTCATCTTCGTATACGCCG-AGGAAGCTGCGGCAACCCATTGGCGTTTTAAAT 24952
Query 124206 CTACCAGTCACTTCTACCACTTTATCATAACTCAAGATGTCTGGATACATACGCTTGGCA 124265
|| || |||| ||| || | ||| || ||| || || || ||||| ||||||
Sbjct 24953 GACCCGGTTACTTTTACGACCTGATCGTAGTTCAGAATATCCGGGTACATGCGCTTGCTC 25012
Query 124266 GCGCACTCCAGTGCCATCTGTTTGATACGATACAGAGGATCAGTTGGTTTCAAGTTGTGT 124325
||||||||||| |||| ||||||||| || ||||| ||| ||| |
Sbjct 25013 GCGCACTCCAGCGCCAGCTGTTTGATGTCGTAATTCGGATCGCCAACTTTGTGGTTCAGC 25072
Query 124326 CCGTCTTTCAGCGCGAAAACAAGTTTCGGGAAAACGGGAGTAATACCTTCTTTGCCAAGA 124385
||||| | ||||| || ||||||||||| || | || | | | || || ||
Sbjct 25073 CCGTCGCGGATGGCGAATACCAGTTTCGGGAACACCGCCGTTTTGCGGTTCTTACCGAGG 25132
Query 124386 CCTTTCATCCGAACTTTCAGAATTGCTTCCTGAATGAGTTCGGATTCCCAGCTAGTGCCT 124445
|| || || ||| || | | ||| || | ||||||||||| |||||
Sbjct 25133 CCGGAGATACGGTTGCGCAGGATGGACTGCTGGATCAAACGCGATTCCCAGCTGGTGCCC 25192
Query 124446 AGTCCAAACCCGAAAGTGCAGAATGGAGTTTGACCATTTGCCGAGTGCAGAGTGTTTACC 124505
|| ||||| ||||| || || || || || || || || | ||||| || || |||
Sbjct 25193 AGGCCAAAACCGAAGGTCACAAACGGCGTCTGGCCGTTGGCGGTATGCAGGGTATTCACC 25252
Query 124506 TCATACTCTAGGCTTTGCATTGCATCATA-CACGGCTTTGCGAGTCTTTTCAATAGCGTA 124564
|||||||| || || | || ||||| ||| |||| ||| | | ||| |
Sbjct 25253 TCATACTCCAGCGACTGGAACGCGTCATAGCACT-CTTTCTCAGTGCG--CGAGTGCGCA 25309
Query 124565 TTGCCTTTGA--TCTGGAATTTTCCAATAACGCGCTTCATCCAAAT-GCTTTTCATGTGT 124621
| ||| | | || || || | ||| | |||| || | || | | |||
Sbjct 25310 TAGCCGTCGGCGTCCGGGATCTGCCACT------CTTCGGCCGTTTTGCGGTGCTTGTTG 25363
Query 124622 CATCTTA-----ACATAAGGTGCCAATGCTTCGTCAATGCGATTAATTGTGTTGCCACCA 124676
| ||| ||| | || |||| ||||||||||||| ||||| ||| |||| ||
Sbjct 25364 AAGCTTGCGGTCACAAACGGGGCCAGCACTTCGTCAATGCGGTTAATGGTGGTGCCGCCG 25423
Query 124677 TAAATGTGACTTGCAACCTGTGCAATGATTTGAGCAGTAACAGCCGCAGCGGTAGCGATG 124736
|||||||| || || ||||| || || || || || || || || | ||||| | ||||
Sbjct 25424 TAAATGTGGCTGGCGACCTGGGCGATAATCTGTGCCGTGACCGCAGTGGCGGTGGAGATG 25483
Query 124737 CTCTTAGGAGTTTCGATCTGTGCATTACCCATGCGGAACCCACGCTCTAACATGCCGTTG 124796
|| || | ||| |||| || |||||||| ||||| | | |||||| ||
Sbjct 25484 GATTTTGGCGGTTCAATCTCGGCGTTACCCATTTTAAACCCGTGGGTCAGCATGCCTTTC 25543
Query 124797 AGATCAATCAACATGCAGTTAAACATTGGGAAGAACGGAGAGTAATCAAGATCATGGAAG 124856
|| ||||||| ||| ||||| ||||| ||||||||||| || || || ||||| || ||
Sbjct 25544 AGGTCAATCAGCATACAGTTGAACATCGGGAAGAACGGTGAATAGTCGAGATCGTGATAG 25603
Query 124857 TGAATAAAACCAGCTTCGTGTGCTTGCAGAACTTCGGTCGGCAGATAGTGCT---TTGCA 124913
|| || ||| ||||| ||| | || ||| |||||| ||||| |||
Sbjct 25604 TGGATCTCACCGCGCTCGTGCGCTGAGACCACATCGCGCGGCAGCAGGTGCTGACGGGCA 25663
Query 124914 AAGTGCTTGCTTACTATGCCCGCGACTAAATCGCGTTGTGTCGGAATAACTTTTGCATCT 124973
|||| ||| || || || || | | |||||| || || || || ||||| |||
Sbjct 25664 TAGTGTTTGGCGACGATACCGGCCAGCAGATCGCGCTGGGTGGGGATCACTTTACTGTCT 25723
Query 124974 TTGTTTGCATTCTCATTCATGATCCC----TTCGTCTTCTTGCTTCATCAGTCCGACGAT 125029
||||| || || ||||| | | | || ||| |||| | ||| || |||
Sbjct 25724 TTGTTGGCGTTTTCATTGAGCAGGGCAGAGTTGGTC----TGCTCTACCAGGCC-ACGGA 25778
Query 125030 TCGCTTGG-TCATATCGCTGTTCATATCGCGAGCAACGTCACGATCATAGCGGTATTCGA 125088
|| | ||| ||| | | | | || || ||||||||||| | |||||| || |
Sbjct 25779 TCTCCTGGTTCAGGCGACCGCGCTTTTCACGCTGCACGTCACGATCGTGGCGGTACTCAA 25838
Query 125089 TGTAGGCGCGAGCCA 125103
|||||||||| ||||
Sbjct 25839 TGTAGGCGCGGGCCA 25853
>seq974
Length=31311
Score = 170 bits (188), Expect = 3e-37
Identities = 256/361 (71%), Gaps = 2/361 (1%)
Strand=Plus/Plus
Query 129109 TCAACGCCCTTGTTATTCTTGAGCACAAGGATTTTTTCAACTTCGAGGTGCCACATTGGG 129168
||||| || ||| || || || || || | |||| ||||| ||||||||||| |||
Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60
Query 129169 TAATATAGAGTTGCGGCACCGCCGCGAACACCACCCTGTGAACAGCTCTTTACCGCAGTC 129228
|| | || || || ||||||||||| || || ||||| || ||| |||||||| |||
Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120
Query 129229 TGGAAGTATTTCCAAAATGGGATAATACCGGTATGTCGCACTTCACCGCTACGAATGCGA 129288
||||||| || | || |||||| ||||| || ||||||||| ||||| ||
Sbjct 121 TGGAAGTGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAAT-CGG 179
Query 129289 GAT-CCCTCGGCACGAATCGCACCGCCGTTGATGCCGATACCAGCGCGTTTGCTGATATA 129347
| | ||| ||||| || |||| |||||||||||||||| || || | | | ||
Sbjct 180 GCTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTA 239
Query 129348 GTCAACGATAGAACTAGCGGTAGCGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTT 129407
| ||||| | || | || ||||||||| |||||| ||| ||||| ||||||
Sbjct 240 TTTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAG 299
Query 129408 GACACAAGAGCTAAACTGCCGAGTCGGGGTGCGAACACCTGCGAGAATCGGAGTTGGCAG 129467
|| || ||||| ||||| || || |||||||| || || | | || || || |||||
Sbjct 300 TACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAG 359
Query 129468 A 129468
|
Sbjct 360 A 360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 720713437638720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |