Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq78 140 1e-27
seq197 102 3e-16
>seq78
Length=1090682
Score = 140 bits (154), Expect = 1e-27
Identities = 330/495 (67%), Gaps = 5/495 (1%)
Strand=Plus/Minus
Query 451103 GATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGAAAAAA 451162
||||| || ||| | ||||| || | || ||| |||| ||| || ||| || | ||
Sbjct 326140 GATGCCAAGCGTCTTATTGGACGCAAGTTTGAAGATGCTACCGTCCAAGCCGACATGAAG 326081
Query 451163 TTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAA 451222
|| ||| ||| || || | | | ||| ||||| | || | ||| || ||
Sbjct 326080 CACTGGCCTTTTGAAGTGGTCAGTGATGGAGGCAAGCCAAAGATCAAGGTAGCATACAAG 326021
Query 451223 GGTGAA-ACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAA 451281
|| ||| || ||| ||| | | ||||||||| || || ||||| ||||| ||||||||
Sbjct 326020 GGAGAAGACAAAACCTTCTTC-CCTGAAGAAGTTAGCTCAATGGTGCTTACAAAAATGAA 325962
Query 451282 AGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGC 451341
||||| || || || | ||| | || |||||||||| || ||||||||
Sbjct 325961 GGAAACTGCTGAGGCTTACCTCGGTAAAACGGTGCAGAATGCAGTAATCACGGTTCCCGC 325902
Query 451342 TTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAA 451401
||||||||||| ||||| |||| || || |||||| | || || |||| |||||
Sbjct 325901 CTATTTCAATGACTCACAAAGGCAGGCCACAAAAGATTCGGGTACGATCTCTGGCTTAAA 325842
Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATC 451461
|||||| || ||||| || ||||| || || ||||| | || || || || | ||
Sbjct 325841 TGTTCTCCGTATTATCAACGAACCGACTGCTGCTGCGATTGCTTACGGTCTCGACAA--- 325785
Query 451462 AAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATAC 451521
|| | | | ||| || || | | || || ||||||| || || ||||
Sbjct 325784 GAAGGGAGGTGGCGAACGTAACGTTCTCATTTTCGACCTTGGTGGCGGCACCTTTGATGT 325725
Query 451522 TTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCA 451581
|| | || | || || ||||| | |||||||| ||| | ||| ||||| |||||
Sbjct 325724 GTCCATCCTGACCATCGAGGATGGTATCTTTGAAGTCAAGTCTACCGCCGGTGACACTCA 325665
Query 451582 TCTAGGAGGTGAAGA 451596
| |||||||||||
Sbjct 325664 CTTGGGAGGTGAAGA 325650
>seq197
Length=620651
Score = 102 bits (112), Expect = 3e-16
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || || |||||||||||||| |||||||| || || || |
Sbjct 447160 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATCACTCTTGAGGTCGAGCCAGCC 447101
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | ||||| || || || || ||||| || || ||||| || ||
Sbjct 447100 GATACTATCGAGAATGTTAAAGCTAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 447041
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || | |||||||| | || || | || || ||
Sbjct 447040 CAGCGTCTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACCCTGTCTGACTACAAC 446981
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | || || | || |||||||| ||| | | ||| ||||
Sbjct 446980 ATTCAGAAAGAGTCCACTCTTCACTTGGTACTTCGTCTGCGAGG 446937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975672986877752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |