Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq78 140 1e-27 seq197 102 3e-16 >seq78 Length=1090682 Score = 140 bits (154), Expect = 1e-27 Identities = 330/495 (67%), Gaps = 5/495 (1%) Strand=Plus/Minus Query 451103 GATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGAAAAAA 451162 ||||| || ||| | ||||| || | || ||| |||| ||| || ||| || | || Sbjct 326140 GATGCCAAGCGTCTTATTGGACGCAAGTTTGAAGATGCTACCGTCCAAGCCGACATGAAG 326081 Query 451163 TTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAA 451222 || ||| ||| || || | | | ||| ||||| | || | ||| || || Sbjct 326080 CACTGGCCTTTTGAAGTGGTCAGTGATGGAGGCAAGCCAAAGATCAAGGTAGCATACAAG 326021 Query 451223 GGTGAA-ACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAA 451281 || ||| || ||| ||| | | ||||||||| || || ||||| ||||| |||||||| Sbjct 326020 GGAGAAGACAAAACCTTCTTC-CCTGAAGAAGTTAGCTCAATGGTGCTTACAAAAATGAA 325962 Query 451282 AGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGC 451341 ||||| || || || | ||| | || |||||||||| || |||||||| Sbjct 325961 GGAAACTGCTGAGGCTTACCTCGGTAAAACGGTGCAGAATGCAGTAATCACGGTTCCCGC 325902 Query 451342 TTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAA 451401 ||||||||||| ||||| |||| || || |||||| | || || |||| ||||| Sbjct 325901 CTATTTCAATGACTCACAAAGGCAGGCCACAAAAGATTCGGGTACGATCTCTGGCTTAAA 325842 Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATC 451461 |||||| || ||||| || ||||| || || ||||| | || || || || | || Sbjct 325841 TGTTCTCCGTATTATCAACGAACCGACTGCTGCTGCGATTGCTTACGGTCTCGACAA--- 325785 Query 451462 AAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATAC 451521 || | | | ||| || || | | || || ||||||| || || |||| Sbjct 325784 GAAGGGAGGTGGCGAACGTAACGTTCTCATTTTCGACCTTGGTGGCGGCACCTTTGATGT 325725 Query 451522 TTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCA 451581 || | || | || || ||||| | |||||||| ||| | ||| ||||| ||||| Sbjct 325724 GTCCATCCTGACCATCGAGGATGGTATCTTTGAAGTCAAGTCTACCGCCGGTGACACTCA 325665 Query 451582 TCTAGGAGGTGAAGA 451596 | ||||||||||| Sbjct 325664 CTTGGGAGGTGAAGA 325650 >seq197 Length=620651 Score = 102 bits (112), Expect = 3e-16 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || |||||||||||||| |||||||| || || || | Sbjct 447160 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATCACTCTTGAGGTCGAGCCAGCC 447101 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | ||||| || || || || ||||| || || ||||| || || Sbjct 447100 GATACTATCGAGAATGTTAAAGCTAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 447041 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || | |||||||| | || || | || || || Sbjct 447040 CAGCGTCTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACCCTGTCTGACTACAAC 446981 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || |||||||| ||| | | ||| |||| Sbjct 446980 ATTCAGAAAGAGTCCACTCTTCACTTGGTACTTCGTCTGCGAGG 446937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975672986877752