Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq78 114 1e-19
seq44 93.3 3e-13
>seq78
Length=1090682
Score = 114 bits (126), Expect = 1e-19
Identities = 243/363 (67%), Gaps = 0/363 (0%)
Strand=Plus/Plus
Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080
|| || || || |||||||||||||| | ||| | || | |||| | |||| ||
Sbjct 325638 CGGTTGTCGAAGTCTTCACCTCCCAAGTGAGTGTCACCGGCGGTAGACTTGACTTCAAAG 325697
Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140
| ||||| || | | || | | |||||| ||| || ||||| | || |||||
Sbjct 325698 ATACCATCCTCGATGGTCAGGATGGACACATCAAAGGTGCCGCCACCAAGGTCGAAAATG 325757
Query 518141 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200
|| || || ||| || || || || ||||| || |||| |||||||||||
Sbjct 325758 AGAACGTTACGTTCGCCACCTCCCTTCTTGTCGAGACCGTAAGCAATCGCAGCAGCAGTC 325817
Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260
||||| || ||||| | | |||||| | |||| || | || | |||||| |||||
Sbjct 325818 GGTTCGTTGATAATACGGAGAACATTTAAGCCAGAGATCGTACCCGAATCTTTTGTGGCC 325877
Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320
|| |||||||| || || ||||| || ||||| || || || |||| || ||||
Sbjct 325878 TGCCTTTGTGAGTCATTGAAATAGGCGGGAACCGTGATTACTGCATTCTGCACCGTTTTA 325937
Query 518321 CCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380
|| | ||||| || |||| |||||||| | | | |||||| || || |||
Sbjct 325938 CCGAGGTAAGCCTCAGCAGTTTCCTTCATTTTTGTAAGCACCATTGAGCTAACTTCTTCA 325997
Query 518381 ggg 518383
|||
Sbjct 325998 GGG 326000
>seq44
Length=1468026
Score = 93.3 bits (102), Expect = 3e-13
Identities = 180/266 (68%), Gaps = 0/266 (0%)
Strand=Plus/Plus
Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 518506
|| || || ||||||| ||||| |||| ||| | | |||| | || | | ||
Sbjct 1242543 ACCTTGAAAGGCCAGTGCTTCATGTCTGCTTGTATCTTGGGGTCGTCGAACTTACGTCCG 1242602
Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566
|| | || ||||| || || | || ||| | || || | || | || | ||||||
Sbjct 1242603 ATGAGTCTCTTTGCGTCGAACACGGTGTTGTTGGGGTTCAGCGCCACCTGGTTCTTGGCT 1242662
Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626
|||||||| ||||| | || || || || || | |||||||||||||| || | ||
Sbjct 1242663 GCATCTCCGATCAGCCGCTCCGTGTCCGTGAAAGCCACATATGATGGAGTAGTCCTGTTG 1242722
Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 518686
|| || || ||||| || ||||| || || || | ||||| || || ||||| | |
Sbjct 1242723 CCCTGGTCGTTCGCGATGATTTCCACGTTTCCGTGCTGCCACACTCCCACACACGAATAC 1242782
Query 518687 GTTGTTCCTAAATCAATACCAATAGC 518712
|| ||||| | ||| || || | |||
Sbjct 1242783 GTCGTTCCAAGATCGATTCCTACAGC 1242808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780733375810564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |