Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq78 114 1e-19 seq44 93.3 3e-13 >seq78 Length=1090682 Score = 114 bits (126), Expect = 1e-19 Identities = 243/363 (67%), Gaps = 0/363 (0%) Strand=Plus/Plus Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 || || || || |||||||||||||| | ||| | || | |||| | |||| || Sbjct 325638 CGGTTGTCGAAGTCTTCACCTCCCAAGTGAGTGTCACCGGCGGTAGACTTGACTTCAAAG 325697 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 | ||||| || | | || | | |||||| ||| || ||||| | || ||||| Sbjct 325698 ATACCATCCTCGATGGTCAGGATGGACACATCAAAGGTGCCGCCACCAAGGTCGAAAATG 325757 Query 518141 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200 || || || ||| || || || || ||||| || |||| ||||||||||| Sbjct 325758 AGAACGTTACGTTCGCCACCTCCCTTCTTGTCGAGACCGTAAGCAATCGCAGCAGCAGTC 325817 Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 ||||| || ||||| | | |||||| | |||| || | || | |||||| ||||| Sbjct 325818 GGTTCGTTGATAATACGGAGAACATTTAAGCCAGAGATCGTACCCGAATCTTTTGTGGCC 325877 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320 || |||||||| || || ||||| || ||||| || || || |||| || |||| Sbjct 325878 TGCCTTTGTGAGTCATTGAAATAGGCGGGAACCGTGATTACTGCATTCTGCACCGTTTTA 325937 Query 518321 CCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380 || | ||||| || |||| |||||||| | | | |||||| || || ||| Sbjct 325938 CCGAGGTAAGCCTCAGCAGTTTCCTTCATTTTTGTAAGCACCATTGAGCTAACTTCTTCA 325997 Query 518381 ggg 518383 ||| Sbjct 325998 GGG 326000 >seq44 Length=1468026 Score = 93.3 bits (102), Expect = 3e-13 Identities = 180/266 (68%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 518506 || || || ||||||| ||||| |||| ||| | | |||| | || | | || Sbjct 1242543 ACCTTGAAAGGCCAGTGCTTCATGTCTGCTTGTATCTTGGGGTCGTCGAACTTACGTCCG 1242602 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566 || | || ||||| || || | || ||| | || || | || | || | |||||| Sbjct 1242603 ATGAGTCTCTTTGCGTCGAACACGGTGTTGTTGGGGTTCAGCGCCACCTGGTTCTTGGCT 1242662 Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 |||||||| ||||| | || || || || || | |||||||||||||| || | || Sbjct 1242663 GCATCTCCGATCAGCCGCTCCGTGTCCGTGAAAGCCACATATGATGGAGTAGTCCTGTTG 1242722 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 518686 || || || ||||| || ||||| || || || | ||||| || || ||||| | | Sbjct 1242723 CCCTGGTCGTTCGCGATGATTTCCACGTTTCCGTGCTGCCACACTCCCACACACGAATAC 1242782 Query 518687 GTTGTTCCTAAATCAATACCAATAGC 518712 || ||||| | ||| || || | ||| Sbjct 1242783 GTCGTTCCAAGATCGATTCCTACAGC 1242808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780733375810564