Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq974 140 3e-28 >seq974 Length=31311 Score = 140 bits (154), Expect = 3e-28 Identities = 248/359 (69%), Gaps = 2/359 (1%) Strand=Plus/Plus Query 141498 TCAACACCTTTGTTGTTCTTCAACACAATCAAGTTTTCCACTTCAAGGTGCCACATAGGG 141557 |||||||| |||||| |||| || | || | |||||||||| ||||||||||||||| Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60 Query 141558 AAGAACATTGTTGCCGAACCTTTACGAATACCACCTTGAGAACAGCAATGAACCGCTGAG 141617 |||||| || || | ||| || | || || ||||| ||| | | ||||| | Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120 Query 141618 TTAAAGTGCTTCCAGAAAGGTACTAC-GCCAGTGTGTTTGACTTCGCCTGGGCCAATTTT 141676 | |||||||| |||| || | ||| ||| ||||| |||| || || ||| Sbjct 121 TGGAAGTGCTTATAGAACGGGA-TACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGG 179 Query 141677 CGAACCTTCAGCTCGAATCATGCCTGCGTTAATCCCGATACCTGCTCGCTTAGAAACATA 141736 || || || || || ||||| || |||||||| || |||| ||||| || Sbjct 180 GCTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTA 239 Query 141737 CTTAACAATAGCAGAGTTTGCATCATTGATTGAGTCAAGGCTGTCACCAGATTCAATAAC 141796 || || || || | | | ||||| || || |||||||||||| | || || | Sbjct 240 TTTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAG 299 Query 141797 TACACATGAACTGAATTGACGAGTTGGGGTACGAACACCAGCCATAATTGGAGTAGGCA 141855 ||| || || ||||| ||||| |||||||| || || |||| ||| ||||| ||||||| Sbjct 300 TACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCA 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524957827556720