Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq236 123 3e-23 seq637 118 1e-21 >seq236 Length=545527 Score = 123 bits (136), Expect = 3e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 62002 GTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCGGACA 62061 || || ||||| || |||||||| ||||||||||||| |||||||| || || || || Sbjct 30882 GTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCGTACC 30823 Query 62062 GCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 62121 ||||||||||| || ||||| |||||||| || ||||||||||| || | ||| || || Sbjct 30822 GCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGCGTCC 30763 Query 62122 TCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTTCAAC 62174 | ||||| ||| || || ||||| || || || |||||||| || Sbjct 30762 ATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTCCAC 30710 >seq637 Length=122170 Score = 118 bits (130), Expect = 1e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 61989 TTACATTTCCTTGGTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGA 62048 |||||| || ||||||||||| | |||||||| ||||||||||| ||||| || Sbjct 107106 TTACATGGACTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGA 107165 Query 62049 ATTAAATCGGACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATG 62108 ||||| || || || || ||||| ||||| || ||||||||||||||||| || ||||| Sbjct 107166 GTTAAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225 Query 62109 TTGAACTGCATCTTCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACC 62168 || | ||||| | |||| ||| || ||||||||||| || || ||||| Sbjct 107226 TTCCATCGCATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACC 107285 Query 62169 TTC 62171 ||| Sbjct 107286 TTC 107288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529588123720000