Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq486 178 2e-39
>seq486
Length=217039
Score = 178 bits (196), Expect = 2e-39
Identities = 836/1311 (64%), Gaps = 24/1311 (2%)
Strand=Plus/Minus
Query 111933 CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAA 111991
|| ||||| ||||| | ||| ||| |||||||| || |||| ||||| | |||
Sbjct 176197 CCCATGCTGCGCGTGTACAACAACACGGCGCGCTACGTGGACCA----GGGCGGCAACAA 176142
Query 111992 G------GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCT 112045
| || | |||| ||||| || ||||| |||||||| || || | ||||||||
Sbjct 176141 GCGGCCCGGCGCCTTCGCCGTCTACCTCGAGCCGTGGCACGCTGACATATTCGAGTTCCT 176082
Query 112046 TGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCT 112105
|| ||| ||| || | ||||| | ||| || || || |||| |||||
Sbjct 176081 AGACTTGAAGAAGAACACGGGCAAAGAGGAAGTGCGCGCGCGAGAGCTGTTCTATGCTCT 176022
Query 112106 CTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTG 112165
||||| ||||||| ||||||||||| |||||| | | | | ||| || | ||
Sbjct 176021 GTGGATCTCAGATCTATTCATGAAGAGGGTTGAGAACAACGAGGAGTGGAGCCTTATGTG 175962
Query 112166 TCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTA-CA 112224
|| || | || || | | ||| ||| || || ||||| || | || ||
Sbjct 175961 CCCTCACGACAGCCCTGGCTTGGCTGATTGTTGGGGAGATGAATTTGATGCATTATATCA 175902
Query 112225 CAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAA 112283
||| || || ||||| || || | | || | ||| | || | |||||
Sbjct 175901 GAAA-TATGAACAAGAAGGTAGGTTTGTTAAAAAAGTCCGCGCT-CAAATCCTATGGAAG 175844
Query 112284 GCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGT 112343
|||||| | || | ||| |||||||| || ||||| |||||||||||||| || ||
Sbjct 175843 GCTATTATTGAGGCACAAGTAGAGACTGGAACTCCATACATGCTTTACAAAGATGCATGC 175784
Query 112344 AACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAA 112403
||| |||||| ||||||||||||||||| ||||| | ||| || || || ||
Sbjct 175783 AACAGAAAGAGCAATCAAAAGAATTTGGGAACCATCAAATGCAGCAATCTATGCACGGAG 175724
Query 112404 ATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTC 112463
|| | || | ||| ||||| ||||| || ||| | || ||||| ||| ||
Sbjct 175723 ATTGTTGAGTACACATCTGCTGATGAAGTAGCTGTTTGCAACTTGGCGTCAATTGCTGTC 175664
Query 112464 CCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACG 112523
|| || ||| | || || | || |||| ||||| ||| ||||| | |||| ||
Sbjct 175663 AACATGTTTGT--AACC-GAAAATAAAACATATGATTTTGAGAAACTAAAACAAGTGACC 175607
Query 112524 AAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT-TGAGAC 112582
|||| | || | ||||| |||| |||| ||| |||| || ||||| |||
Sbjct 175606 AAAATCATAACTGAGAACCTGAACAAGATTATCGATGTTAATTACTATCCCGTCCCAGA- 175548
Query 112583 TGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGA 112642
|| || ||||| ||||| ||||| || || || | || ||||||||||| || ||
Sbjct 175547 AGCGAAAAAGTCTAACATGAGGCACCGACCTATCGGCATTGGCGTCCAAGGTCTGGCCGA 175488
Query 112643 TGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCG 112702
|| || | | |||| | | || || | ||| || | ||||| |
Sbjct 175487 TGCTTTTGTATTGATGCGCCTTCCTTACGAGAGTGAAGGAGCCCAGAAGCTCAATCAACA 175428
Query 112703 TATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGA 112762
|||||||| || || ||| | | ||| | || || || | || |||| ||
Sbjct 175427 AATATTTGAAACCATCTATTATGGGGCTTTAGAAGCTAGCTGTGAACTGGCCGAAAAACT 175368
Query 112763 TGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATAT 112822
|| |||||||| | || |||| ||| || |||| | | |||| ||| ||
Sbjct 175367 CGGCGTTTATGAAACGTATGCTGGTTGTCCGGCCAGTGAAGGAATATTGCAATATGAAAT 175308
Query 112823 GT-GGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGG 112881
|| ||||| | | ||| | | |||||| ||||| ||| | ||| |
Sbjct 175307 GTGGGGAAAGACA-CCCACAGACCTGTGGGACTGGAGTGCTCTGAAGCAGAAGATCGCGA 175249
Query 112882 AGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA 112941
| | || || || ||| ||| ||| |||| || ||||| || |||||||| ||||| |
Sbjct 175248 AACATGGCCTGCGGAACTCTCTGTTGCTGGCCCCCATGCCCACCGCCTCCACTGCACAGA 175189
Query 112942 TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCC 113001
| | || || ||||||| ||||| || | ||| | ||||| || | |||||| |
Sbjct 175188 TTCTTGGCAACAATGAATCATTTGAGCCATTCACTTCAAACATTTACCAAAGAAGAGTTC 175129
Query 113002 TCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTC 113061
| | ||||| || | | |||||| | || || | || |||| ||| || |
Sbjct 175128 TTTCTGGAGAATTCCAGGTGGTCAACCATCACCTGCTTCGCGATCTCACCGAGGCTGATT 175069
Query 113062 TCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTG 113121
| ||| | |||||||| ||||||| | | ||| |||||||| |||||
Sbjct 175068 TATGGGATGATGATATGAAAAATCTCATTATACACAACAATGGATCCATTCAGTCTATTG 175009
Query 113122 TGGATATTCCAGATGAAATTAAGA-AGTTGTACCGCACAGTTTGGGAAATCAAGATGAAG 113180
|||||| | |||| ||||| | | ||| || || ||||| || |||||
Sbjct 175008 AAAGTATTCCCAAAGAAA-TAAGAGATCTTTACAAGACTGTGTGGGAGATATCTGTGAAG 174950
Query 113181 GATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAA 113231
|| | |||||||| ||||||||| |||||||| || ||||||
Sbjct 174949 ACCACAATCCAAATGGCCGCGGATCGTGGTGCTTTCATTGACCAGAGTCAA 174899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620728479851680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |