Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq486 187 3e-42
>seq486
Length=217039
Score = 187 bits (206), Expect = 3e-42
Identities = 624/959 (65%), Gaps = 13/959 (1%)
Strand=Plus/Plus
Query 105691 TTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTT 105750
|||||||||||||||||| |||||| | || ||||| | || |||||
Sbjct 174899 TTGACTCTGGTCAATGAAAGCACCACGATCCGCGGCCATTTGGATTGTGGTCTTCACAGA 174958
Query 105751 GATTTCCCACACTGTGCGGTAGAGAT-TCTTGATATCATCTGGGATATCTGAGATATTTT 105809
|| |||||||| || ||| |||| |||| || || | || ||| | ||| |
Sbjct 174959 TATCTCCCACACAGTCTTGTAAAGATCTCTT-ATTTCTTTGGGAATACTTTCAATAGACT 175017
Query 105810 GAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCT 105869
|||| || || | | ||||||| |||||||| | ||| | | || ||
Sbjct 175018 GAATGGATCCATTGTTGTGTATAATGAGATTTTTCATATCATCATCCCATAAATCAGCCT 175077
Query 105870 TCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTC 105929
||||||| | || || | |||||| | | || ||||| | || |||||
Sbjct 175078 CGGTGAGATCGCGAAGCAGGTGATGGTTGACCACCTGGAATTCTCCAGAAAGAACTCTTC 175137
Query 105930 TCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGG 105989
| | || ||||| | ||| | || ||||| ||||||| || || | || ||||| |
Sbjct 175138 TTTGGTAAATGTTTGAAGTGAATGGCTCAAATGATTCATTGTTGCCAAGAATCTGTGCAG 175197
Query 105990 TGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGC 106049
||||||| || ||||| || |||| ||| ||| ||| || || || | || | |||
Sbjct 175198 TGGAGGCGGTGGGCATGGGGGCCAGCAACAGAGAGTTCCGCAGGCCATGTTTCGCGATCT 175257
Query 106050 GTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAA 106107
| ||| ||| || |||||| | | | | | ||| || | ||||||| ||| |
Sbjct 175258 TCTGCTTCAGAGCACTCCAGTCCCACAGGTCTG-TGGGTGTCTT-TCCCCACATTTCATA 175315
Query 106108 TTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC 106167
||| | | |||| | ||| |||| || | || ||||| || | |||
Sbjct 175316 TTGCAATATTCCTTCACTGGCCGGACAACCAGCATACGTTTCATAAACGCCGAGTTTTTC 175375
Query 106168 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227
|||| ||||||||| || || | | | | ||| ||||||||||| || | |||
Sbjct 175376 GGCCAGTTCACAGCTAGCTTCTAAAGCCCCATAATAGATGGTTTCAAATATTTGTTGATT 175435
Query 106228 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGA 106286
| || || |||| | || || | | | || ||| ||| | ||| |||| || |
Sbjct 175436 GAGCTTCTGGGCTCCTTCACTCTCGTAAG-GAAGGCGCATCAATACAAAAGCATCGGCCA 175494
Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 106345
||||||| || || | || ||||||| ||| | ||| ||||||||| ||| |||
Sbjct 175495 GACCTTGGACGCCAATGCCGATAGGTCGGTGCCTCATGTTAGACTTTTTCGCT-TCTGGG 175553
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405
|||||||| |||| || || | ||| || || | || | || || || | |
Sbjct 175554 ACGGGATAGTAATTAACATCGATAATCTTGTTCAGGTTCTCAGTTATGATTTTGGTCACT 175613
Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465
| | ||||| ||| ||||| | || | | ||| | ||| || | | ||
Sbjct 175614 TGTTTTAGTTTCTCAAAATCATATGTTTTATT---TTCGGTTACAAACATGTTGACAGCA 175670
Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525
||||| ||||| ||||||||||| ||||| | ||||||||| | ||| || ||
Sbjct 175671 ATTGACGCCAAGTTGCAAACAGCTACTTCATCAGCAGATGTGTACTCAACAATCTCCGTG 175730
Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585
|| | ||| | || || || |||||||||||||| || |||||| ||||||| |||
Sbjct 175731 CATAGATTGCTGCATTTGATGGTTCCCAAATTCTTTTGATTGCTCTTTCTGTTGCATGCA 175790
Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644
|| ||||| |||||||| || || || ||||| |||| || | ||| ||||||||
Sbjct 175791 TCTTTGTAAAGCATGTATGGAGTTCCAGTCTCTACTTGTGCCTCAATAATAGCCTTCCA 175849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589967569680560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |