Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_015263.1
Length=114768
Score E
Sequences producing significant alignments: (Bits) Value
seq1512 232 5e-56
>seq1512
Length=4801
Score = 232 bits (256), Expect = 5e-56
Identities = 373/528 (71%), Gaps = 45/528 (9%)
Strand=Plus/Plus
Query 21855 AGTAGTATTGAATTAAAAAATGAAAGTTTATGCTTGACAAAATGAAAATTA--TTTAGCA 21912
||||| | | ||| ||||||| | | || ||||||| || ||||| ||| | |
Sbjct 118 AGTAGAAATAAATAAAAAAATATCATCTAATATTTGACAAC--GATAATTAATTTTGGTA 175
Query 21913 TAATAGTATATATAGAAATAAAGGAGAACATAAATAATGGTA---AAATTAACACAAAAA 21969
||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||
Sbjct 176 TAATAGTATATATAGAAATAAAGGAGAAC-TAACAAATGGTAGTCAAATTAACGCAAAAA 234
Query 21970 CAAGCCGATTATCTTAAAAGTTTTAGAAA---------TGA------CAAAAAATTAGCT 22014
||||| ||||||||| ||| |||| |||| ||| ||||||| |||
Sbjct 235 CAAGCTGATTATCTTGAAACTTTTGGAAACCTTGAAGATGAAATAAACAAAAAACGAGCG 294
Query 22015 TTCTATCATATTGGTAGGTGGGGTTTTGGTTATAATCTTAAAGACGGTAACGAAAAAGTT 22074
| | ||| || | | | |||| ||| || ||| | || ||| ||| ||| |
Sbjct 295 CTTTGTCACATCACTCGTTTTGGTTATGGATACAATTGGATAGGCGG---CGATAAATGT 351
Query 22075 TACGCAACTAATGAAGAAGCACCGTTCACT--TACGATGaaaaagaaaaaaTGTTAGATG 22132
||| || || | || | | ||||| | || ||||| || | || |
Sbjct 352 C---CAAGTAGTG--------CTTTTGAGTGTTACGA-GCAATTGAAAA--TGGTTGAAG 397
Query 22133 CTGTTATTAATGGTTATGAAGTTGTCGTACCTACATTTAAGTTTTTTAACTATTTTACAA 22192
|||| ||||| |||||||||||| | | ||||| ||||||||||| ||||| || | |
Sbjct 398 CTGTCATTAACGGTTATGAAGTTATTGAACCTAAATTTAAGTTTTATAACTTTTCTGATA 457
Query 22193 AAAGTC-ATTACC--CTTTATATTATGCTGGAAATTTGAACCAATTAACGGACAGTGAAG 22249
|| | | | | ||||||||||||||| | | || |||||||| | ||
Sbjct 458 GTAGCGGAGGAACTGCATTATATTATGCTGGACAGTCTAAACAATTAACAAAATTCGAGC 517
Query 22250 AAGAAGCTCTTAAAGTTAAAAAAGATAGCGAAGAATATAAAGCCTTGGAACTTTTAGGTT 22309
|||| |||||| |||||||| | | ||||| ||||||||||| ||| | ||||||||
Sbjct 518 AAGATGCTCTTGAAGTTAAAGAGGGGAGCGAGGAATATAAAGCTTTGTTAGCTTTAGGTT 577
Query 22310 TCCTTAAAGAAAAGGTATGATAACATCTTTTGAATCACTAGCTGAAAG 22357
|| || ||||| | ||||||||||||||||||||||||||||||||||
Sbjct 578 TCGTTGAAGAAGAAGTATGATAACATCTTTTGAATCACTAGCTGAAAG 625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 367124772870786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |