Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_015263.1 Length=114768 Score E Sequences producing significant alignments: (Bits) Value seq1512 232 5e-56 >seq1512 Length=4801 Score = 232 bits (256), Expect = 5e-56 Identities = 373/528 (71%), Gaps = 45/528 (9%) Strand=Plus/Plus Query 21855 AGTAGTATTGAATTAAAAAATGAAAGTTTATGCTTGACAAAATGAAAATTA--TTTAGCA 21912 ||||| | | ||| ||||||| | | || ||||||| || ||||| ||| | | Sbjct 118 AGTAGAAATAAATAAAAAAATATCATCTAATATTTGACAAC--GATAATTAATTTTGGTA 175 Query 21913 TAATAGTATATATAGAAATAAAGGAGAACATAAATAATGGTA---AAATTAACACAAAAA 21969 ||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||||| Sbjct 176 TAATAGTATATATAGAAATAAAGGAGAAC-TAACAAATGGTAGTCAAATTAACGCAAAAA 234 Query 21970 CAAGCCGATTATCTTAAAAGTTTTAGAAA---------TGA------CAAAAAATTAGCT 22014 ||||| ||||||||| ||| |||| |||| ||| ||||||| ||| Sbjct 235 CAAGCTGATTATCTTGAAACTTTTGGAAACCTTGAAGATGAAATAAACAAAAAACGAGCG 294 Query 22015 TTCTATCATATTGGTAGGTGGGGTTTTGGTTATAATCTTAAAGACGGTAACGAAAAAGTT 22074 | | ||| || | | | |||| ||| || ||| | || ||| ||| ||| | Sbjct 295 CTTTGTCACATCACTCGTTTTGGTTATGGATACAATTGGATAGGCGG---CGATAAATGT 351 Query 22075 TACGCAACTAATGAAGAAGCACCGTTCACT--TACGATGaaaaagaaaaaaTGTTAGATG 22132 ||| || || | || | | ||||| | || ||||| || | || | Sbjct 352 C---CAAGTAGTG--------CTTTTGAGTGTTACGA-GCAATTGAAAA--TGGTTGAAG 397 Query 22133 CTGTTATTAATGGTTATGAAGTTGTCGTACCTACATTTAAGTTTTTTAACTATTTTACAA 22192 |||| ||||| |||||||||||| | | ||||| ||||||||||| ||||| || | | Sbjct 398 CTGTCATTAACGGTTATGAAGTTATTGAACCTAAATTTAAGTTTTATAACTTTTCTGATA 457 Query 22193 AAAGTC-ATTACC--CTTTATATTATGCTGGAAATTTGAACCAATTAACGGACAGTGAAG 22249 || | | | | ||||||||||||||| | | || |||||||| | || Sbjct 458 GTAGCGGAGGAACTGCATTATATTATGCTGGACAGTCTAAACAATTAACAAAATTCGAGC 517 Query 22250 AAGAAGCTCTTAAAGTTAAAAAAGATAGCGAAGAATATAAAGCCTTGGAACTTTTAGGTT 22309 |||| |||||| |||||||| | | ||||| ||||||||||| ||| | |||||||| Sbjct 518 AAGATGCTCTTGAAGTTAAAGAGGGGAGCGAGGAATATAAAGCTTTGTTAGCTTTAGGTT 577 Query 22310 TCCTTAAAGAAAAGGTATGATAACATCTTTTGAATCACTAGCTGAAAG 22357 || || ||||| | |||||||||||||||||||||||||||||||||| Sbjct 578 TCGTTGAAGAAGAAGTATGATAACATCTTTTGAATCACTAGCTGAAAG 625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 367124772870786