Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_015265.1
Length=37236
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 331 2e-86
>seq1001
Length=29257
Score = 331 bits (366), Expect = 2e-86
Identities = 733/1090 (67%), Gaps = 36/1090 (3%)
Strand=Plus/Minus
Query 15739 CCAGATAGCGGTCGGTGATGCGCTGGCGGAACGTCAGGTCTTCGAGCGGCGGGGCAGGGC 15798
|||||||| ||||||||||||||||| | ||||||| ||| ||||||||| | |||
Sbjct 7862 CCAGATAGGTATCGGTGATGCGCTGGCGCAGGGTCAGGTTTTCCAGCGGCGGGACGGGGG 7803
Query 15799 AGAAGTCGTAATCGATGAAGCCCTGGCCGGCCTTGAGCGAATCCTTGTCGTTCGCGCCCG 15858
| ||||||||||||| | || ||||| || || | ||| | ||| | |||
Sbjct 7802 TGTAGTCGTAATCGATATACAGCTTCCCGGCTTTCAGGGTTTCCACGGTGTTTGACTCCG 7743
Query 15859 GATCGAACCAGCATTCGCCGTCGATCAGGTAGCCGGCGGTCTTCCACGCGCGGAACTTCG 15918
| ||| |||||||| ||||| | | |||||| | ||| | ||||||| || |
Sbjct 7742 GGTCGTACCAGCATGACCCGTCAACGATATAGCCGTTATTTTTCAGCTCGCGGAATTTGG 7683
Query 15919 CATTCACGCCATCGACGATGTCGCGCATCAGCGT-GCGGCTCATCGGCTGGTCGACGGCC 15977
|||| | || |||| |||||||| || ||||| |||| | |||| ||| | |||
Sbjct 7682 CATTGATACCGGCGACAATGTCGCGGATAAGCGTTGCGGAA-ACGGGCTTGTCCATCGCC 7624
Query 15978 CACATGTGCGCCTCGGCCATCGTGTCGGCGATCACCTGCGCACTGCGCACATAGTTCTCG 16037
||| ||||||||| |||||||||||||| | ||||||||| |||| ||||| ||
Sbjct 7623 CACGCGTGCGCCTCCGCCATCGTGTCGGCCAGCACCTGCGCCGTGCGGGTGTAGTTTTCA 7564
Query 16038 AACGCCCACAGCTTGTCCTCGGAACAGGTGCGCGATCCCCATAGACGGTAA-CCGTCCGC 16096
||| | | | || || || ||||| || ||||| | || || |||||
Sbjct 7563 AACACGAATAAAGGATCGTCCGAGCAGGTACGGTTGCCCCAGA-ACTTAAAGCCGTCGTT 7505
Query 16097 GTTCACCAGCGTGGTCACTTCGTGGCTG-TTCAGGTAGCCCGCGTCGGTGTTCGGGTCCT 16155
| | ||||| ||||| || | ||| ||||| | |||||||| | | ||||
Sbjct 7504 GCGGATTAGCGTTGTCACCCCG-GCCTGATTCAGCAGGTTGGCGTCGGTAGCCTGCTCCT 7446
Query 16156 GCAGGTCCCAGAACACGTCGCGGCTGATGCCCGTGACGCCGTTGACCACGACGTTCGAGA 16215
||| ||||| | || | ||||| ||| |||||||| || || | ||||| || |
Sbjct 7445 GCAAATCCCATGAGACCGAGGCGCTGACGCCGGTGACGCCATTCACGCCAACGTTAGACA 7386
Query 16216 TCGTCTTGTGCCAGCCGATCTCTTCGTCGATCTTCGCGCGCATGCCGAGCGCGCGCGCCG 16275
||| |||||||| ||| |||| | |||||| || ||||||| |||||||||||| || |
Sbjct 7385 GCGTTTTGTGCCATCCGGTCTCCTGGTCGATTTTGGCGCGCAGGCCGAGCGCGCGGGCGG 7326
Query 16276 TTGCCCACGTGATGTCCTCGGCGTTGGTCGTGGTGTTCCAGTTCACGAAATCCGGCCAGA 16335
| ||||| | || || |||| | |||||||| ||| || || || || |
Sbjct 7325 TCGCCCATGCAATATCGGTTTCGTTCGCCGTGGTGTCCCATGCCAGAAAGTCAGGGTGAA 7266
Query 16336 TCGTCATCAGCTCACGCTGGCCGAAGTTCGCGCGGTAGGTGGTCGCTTCCTCCTTCGTCT 16395
| ||||||||| ||||||| ||| ||| | ||||| || | || || | ||||
Sbjct 7265 TGACCATCAGCTCGCGCTGGCTGAAATTCTCACGGTATTTGATGGCGTCGGAAATGGTCT 7206
Query 16396 GTGC-GCCGAACGCGCTGATGTAGCCGAAGCCGCGCAGCTTCTGCGCGATCGTCGCAAGC 16454
||| ||| ||||||| | ||||||||| ||||||| |||| | | | |||||||
Sbjct 7205 -TGCAGCCCCACGCGCTTACGTAGCCGAACGCGCGCAGGCTCTGGCAGGTTGACGCAAGC 7147
Query 16455 TCGGACGCGACGGGCAGGGTGTCGAGGCCTGGACAACCGAGCACGCGCGGCTTCACGCCG 16514
||| ||| || | | || || || || || ||||| | ||||||||| ||||||
Sbjct 7146 GCGGTCGCCACTTCCTGCGTATCCAGCCCCGGCACGCCGAGAATGCGCGGCTTAACGCCG 7087
Query 16515 AGGCGGCTCTTCGCGGCGAGCAGCGCCTTCATACCGGTGTACTGACCGTCCGCGGTGGTC 16574
| | | ||||| | | |||||| |||| |||||||| | |||| || ||||
Sbjct 7086 GTGACGGTTTTCGCCGTTAACAGCGCTTTCAGCCCGGTGTATTTGCCGTTTTCGTCGGTC 7027
Query 16575 GTGCCGATCACGTTG---CTGGT---------CGTGGTATCCGGATCCTTGCC-GGTC-- 16619
|||||||| | |||| |||| || | ||||| || |||| ||||
Sbjct 7026 GTGCCGATGATGTTGGAAATGGTTTCTTTCTGCGCCGCTTCCGGGTC--TGCCGGGTCGT 6969
Query 16620 -----------GGCACACGCACCGCGACGATCAGCGGGGACGTCTGCGCGGCGATCGCAT 16668
|| || |||||| | || || | ||| ||| ||||||| || |
Sbjct 6968 CGACACCTTCTGGAACGCGCACCACCACAATGACCGGTTTGCACTGGTCGGCGATGGCCT 6909
Query 16669 CGAGCGAACGCGCGAGCGTGCCCTTCGTGCCTGCCTTGCCGATCGCTGCCTGCACGTCGG 16728
|| || || |||||||| || | || || || ||||| || | |||||| |
Sbjct 6908 GCAGGGATTTTGCCAGCGTGCCTTTTTTACCGGCTTTACCGATAGCCGTTTGCACGCTGT 6849
Query 16729 TGATGAGAACGGGACGGTTTTCGGGGAAGGTGGCCGCATCGGCGTCGTCGGCCGTGCTGA 16788
| || || || || |||| |||||| || || || || ||| |||||||| ||
Sbjct 6848 TAATCAGTACCGGCTCGTTTAAGGGGAATGTCTTTGCGTCAGCATCGCTGGCCGTGCAGA 6789
Query 16789 CCAGGCCGAT 16798
||| ||||||
Sbjct 6788 CCATGCCGAT 6779
Score = 123 bits (136), Expect = 6e-24
Identities = 128/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 21808 GTACGCGCCTTCCTGCAGCAGCTTCACCATCGGCTCGGATTCGAGCTCGAGCGCGGCAGC 21867
||| ||| |||||||||||||||||||| ||||||||| || ||| |||| | ||
Sbjct 2903 GTAGGCGTTTTCCTGCAGCAGCTTCACCAGCGGCTCGGACTCAAGCGACAGCGTGCGCGC 2844
Query 21868 GATTTCGTCCTGCTGTTCTTTCGGGTACAGGGAAACGAGCCGGGCCTTCTTCTCGGCGAG 21927
|||| |||||||||| |||| |||||| || || ||||| ||||| ||| ||
Sbjct 2843 GATTGCGTCCTGCTGGTCTTCCGGGTATAGCGAGACGAGTGTCGCCTTTCGTTCGCTCAG 2784
Query 21928 GATGGTTTCGTAGTCGAGCTCCTCGACGATGTCCGGCGCTGGCAGCTG 21975
||||||||| ||||| || || || |||| ||| ||||| | |||||
Sbjct 2783 GATGGTTTCATAGTCCAGTTCTTCCACGACGTCAGGCGCGGCGAGCTG 2736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119031064137944
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