Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_015269.1
Length=118351
Score E
Sequences producing significant alignments: (Bits) Value
seq637 147 2e-30
seq236 87.8 1e-12
>seq637
Length=122170
Score = 147 bits (162), Expect = 2e-30
Identities = 144/186 (77%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 27376 TTACATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGC 27435
|||||| | |||||| || ||||| | |||||||| | ||| ||||| |||||| |
Sbjct 107106 TTACATGGACTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGA 107165
Query 27436 GTTAAATCGAACAGCATAGCCAGAGACACGGATAGTCAATTGAGGATATTTTTCAGGATG 27495
|||||| || || || |||||||| |||||||| |||| ||||||||||| ||||||||
Sbjct 107166 GTTAAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225
Query 27496 TTTCTGTGCATCCAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCACC 27555
|| | ||||| | ||| |||||| | | || || || || ||||||||||||||
Sbjct 107226 TTCCATCGCATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACC 107285
Query 27556 TTCGAT 27561
||||||
Sbjct 107286 TTCGAT 107291
>seq236
Length=545527
Score = 87.8 bits (96), Expect = 1e-12
Identities = 122/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 27388 AGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCGTTAAATCGAAC 27447
|||||| ||||| ||||||||| ||| ||||| | ||||| | ||| || || ||
Sbjct 30883 AGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCGTAC 30824
Query 27448 AGCATAGCCAGAGACACGGATAGTCAATTGAGGATATTTTTCAGGATGTTTCTGTGCATC 27507
||||| ||||| || || || |||| || || |||||||| || || | || ||
Sbjct 30823 CGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGCGTC 30764
Query 27508 CAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCACCTTC 27558
|| ||| || |||| | || || || || |||||||||||||||||
Sbjct 30763 CATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTC 30713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 378590122182608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |