Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq995 91.5 2e-13 >seq995 Length=29666 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/140 (76%), Gaps = 5/140 (4%) Strand=Plus/Minus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 |||| |||||||||||||||||||| || |||| || | ||| ||| | ||||||| Sbjct 22250 TGGGCGATTAGCTCAGTTGGTAGAGCATCTCCTTTACACGGAGGGGGTCGGCGGTTCGAG 22191 Query 22535 TCTCCTATTCTCCACTCAATCC---TCTTTAGCTCAGC-GGTAGAGCGGTTGACTGTTAA 22590 | || |||| || | | || ||||||||| |||||||| ||||||| |||| Sbjct 22190 CCCGTCATCGCCCAC-CATTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAA 22132 Query 22591 TCAATTGGTCCCTGGTTCGA 22610 |||||||||| | ||||||| Sbjct 22131 TCAATTGGTCGCAGGTTCGA 22112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560595428365600