Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq197 176 1e-38 >seq197 Length=620651 Score = 176 bits (194), Expect = 1e-38 Identities = 169/214 (79%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCAT 194986 ||||||||| || || || ||||| || ||||| ||||| |||| |||| || | |||| Sbjct 447664 CAAAACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAAG-GTGCGACCAT 447722 Query 194987 CTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGT 195046 | || ||||| ||||| |||||||| || || |||||||| ||||| ||||| || |||| Sbjct 447723 CCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGT 447782 Query 195047 CTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCG 195106 |||| || || ||| || ||||| |||||||| ||| ||| ||||| ||||| | | Sbjct 447783 CTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGGGTGATGG 447842 Query 195107 TCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||||||| |||||| ||||| | ||||| Sbjct 447843 TCTTTCCTGTCAGAGTTTTGACGAAAATCTGCAT 447876 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 || ||||| |||||||| ||||| || ||||| || || || ||||| || | | || Sbjct 446483 TCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGT 446542 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| ||||||||||| |||||||| || || || ||||| ||||||||||| Sbjct 446543 GCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCC 446602 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || ||| || ||||| |||||||| ||| ||| ||||| || Sbjct 446603 TTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGACTTCTAG 446662 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || |||| ||||| ||||| | ||||| Sbjct 446663 GGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 446704 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 || ||||| |||||||| ||||| || ||||| || || || ||||| || | | || Sbjct 448111 TCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGT 448170 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| ||||||||||| |||||||| || || || ||||| ||||||||||| Sbjct 448171 GCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCC 448230 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || ||| || ||||| |||||||| ||| ||| ||||| || Sbjct 448231 TTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGACTTCCAG 448290 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || |||| ||||| ||||| | ||||| Sbjct 448291 GGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 448332 Score = 163 bits (180), Expect = 6e-35 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || ||||| ||||| |||| || || | |||||||| || || Sbjct 447901 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCTTCTAGTTG 447960 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| || || || |||||||| || || || || ||||| || || || Sbjct 447961 CTTACCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTT 448020 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || ||||| |||||||||||| ||| ||||| || || | |||||||| || Sbjct 448021 GGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGT 448080 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 || ||| || ||||| | |||||| Sbjct 448081 CAGAGTCTTCACGAAAATCTGCATT 448105 Score = 158 bits (174), Expect = 3e-33 Identities = 165/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATC 194987 || || | |||||| |||||||| ||||| || ||||| |||| |||| || | ||||| Sbjct 446265 AATACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAG-GTGCGACCATC 446323 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || ||||| ||||| |||||||| || || || |||||||| ||||| || || ||||| Sbjct 446324 CTCCAGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTC 446383 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || || || ||| || ||||| |||||||||||| ||| ||||| || || | || Sbjct 446384 CTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTGATGGT 446443 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||||| |||| ||| || ||||| | |||||| Sbjct 446444 CTTTCCCGTCAGAGTCTTCACGAAAATCTGCATT 446477 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||||||||| |||||||| || ||||| || || | | || | || || Sbjct 446720 CAATACCAAGTGAAGAGTCGACTCTTTCTGGATATTATAGTCTGACAATGTACGGCCGTC 446779 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| || || ||||| |||||||||||||| || ||||| ||||| |||||||| ||||| Sbjct 446780 TTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 446839 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || ||| || ||||| |||||||| ||| ||| ||||| || || | || Sbjct 446840 TTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGAGTGATTGT 446899 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || | ||||| ||||| | ||||| Sbjct 446900 CTTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 446932 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | |||||| || |||||||| || ||||| || || | | || | || || Sbjct 448877 CAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGGCCGTC 448936 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| || || ||||| |||||||||||||| || ||||| ||||| |||||||| ||||| Sbjct 448937 TTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 448996 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || ||| || ||||| |||||||| ||| ||||||||| || || | || Sbjct 448997 TTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCCACTTCCAGAGTGATTGT 449056 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || | ||||| ||||| | ||||| Sbjct 449057 CTTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 449089 Score = 145 bits (160), Expect = 2e-29 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCAT 194986 ||||||||| || || || || ||||| || || ||||| |||| |||| || | || | Sbjct 447176 CAAAACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGACAAG-GTGCGGCCGT 447234 Query 194987 CTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGT 195046 |||| |||||||| ||||| ||||| | | || |||||||| ||||| || ||||||| Sbjct 447235 CTTCAAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGT 447294 Query 195047 CTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCG 195106 |||| || || ||||| ||||| |||||||| ||| ||| ||||| || || | | Sbjct 447295 CTTGGATCTTGGCTTTGACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGAGTGATGG 447354 Query 195107 TCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || |||| ||||| ||||| | ||||| Sbjct 447355 TCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 447388 Score = 145 bits (160), Expect = 2e-29 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCAT 194986 ||||||||| || || || ||||| || ||||| ||||| |||| |||| || | |||| Sbjct 448377 CAAAACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAAG-GTGCGACCAT 448435 Query 194987 CTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGT 195046 | || ||||| || || |||||||| | | || |||||||| ||||| || ||||||| Sbjct 448436 CCTCTAGCTGGTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGT 448495 Query 195047 CTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCG 195106 |||| || || ||||| ||||||||| |||| ||| ||| ||||| || || | | Sbjct 448496 CTTGGATCTTGGCTTTGACATTCTCAATGATGTCTGAAGCTTCAACTTCCAGAGTGATGG 448555 Query 195107 TCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||| |||| ||| || || || | ||||| Sbjct 448556 TCTTTCCCGTCAGAGTCTTGACAAAGATCTGCAT 448589 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||||||||| || || ||||| || | || || | ||||| || | ||| Sbjct 449361 GTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTCCAACTG 449420 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || ||||| ||||| | | || |||||||| ||||| || ||||||||||| || || Sbjct 449421 TTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGGATCTT 449480 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || |||||||| ||||| || ||||||||| ||||||| ||||| || || Sbjct 449481 GGCCTTCACATTCTCAATTGTGTCTGAGGCTTCCACTTCCAGGGTAATTGTCTTGCCAGT 449540 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||||| ||||| | ||||| Sbjct 449541 CAGGGTTTTCACGAAAATCTGCAT 449564 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||||||||||| ||||| ||||| || | || || | |||||||| | ||| Sbjct 446957 GTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAACTG 447016 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| || || || ||||||||||| ||||| || ||||| || || || Sbjct 447017 CTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTT 447076 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || ||||| || || || | || || ||||| || | || || || || Sbjct 447077 AGCTTTAACATTCTCGATAGTATCGGCTGGCTCGACCTCAAGAGTGATAGTTTTACCAGT 447136 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | ||||| Sbjct 447137 AAGAGTCTTGACGAAAATCTGCAT 447160 Score = 120 bits (132), Expect = 7e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995 ||| || ||||||||||| || || ||||| |||| |||| || | || ||||| |||| Sbjct 449589 GTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAG-GTGCGGCCGTCTTCAAGCT 449647 Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 |||| || |||||||| || || || ||||| || || ||||| |||||||| || || | Sbjct 449648 GCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCTTTGTCCTGGATCT 449707 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 | ||| |||||||| |||||||| | | || || || | || | || || || | Sbjct 449708 TCGCCTTAACGTTCTCGATGGTGTCTGCAGGCTCGACCTCCAAAGTGATGGTTTTCCCAG 449767 Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 449768 TCAGGGTCTTCACGAATATCTGCAT 449792 Score = 116 bits (128), Expect = 8e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || |||||||| ||||| ||||| || |||||||| || || ||| Sbjct 448725 GCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCTTTG 448784 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || |||||||||||||| ||| ||| ||||| || || | |||||||| |||| |||| Sbjct 448785 ACATTCTCAATGGTGTCTGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTT 448844 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 448845 TTCACGAAAATCTGCAT 448861 Score = 107 bits (118), Expect = 4e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 194994 CTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 ||| || ||||| ||||| | | || |||||||| ||||| || ||||||||||| || Sbjct 449190 CTGTTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGGAT 449249 Query 195054 TTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113 || ||| || |||||||| ||||| || ||||||||| ||||||| ||||| || Sbjct 449250 CTTGGCCTTCACATTCTCAATTGTGTCTGAGGCTTCCACTTCCAGGGTAATTGTCTTGCC 449309 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| ||||| | ||||| Sbjct 449310 AGTCAGGGTTTTCACGAAAATCTGCAT 449336 Score = 98.7 bits (108), Expect = 2e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | |||||| || |||||||| || ||||| || || | | || | || || Sbjct 447404 CAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGGCCGTC 447463 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| || || ||||| |||||||||||||| || ||||| ||||| ||||| || ||||| Sbjct 447464 TTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC 447523 Query 195048 TTGAATTTT 195056 ||| || || Sbjct 447524 TTGGATCTT 447532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109456097871998