Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_016073.1
Length=157950
Score E
Sequences producing significant alignments: (Bits) Value
seq974 98.7 1e-15
>seq974
Length=31311
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 54169 CCGATGCCAGCACGTTTGGAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAG 54228
||||| || ||||| | |||||| || | ||||||| | | ||||| || || ||
Sbjct 214 CCGATACCGGCACGCTGGGAAACGTATTTCACGATGGCGCTGGACGTGGCGTTGATGGAA 273
Query 54229 TCCAATGTGTCACCAGTTTTGATCAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGG 54288
|||| |||||||| | ||||| ||| || ||||||||||| ||||| ||||||||
Sbjct 274 TCCAGGCTGTCACCACACTCGATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGC 333
Query 54289 ACGCCGGACATAATAGGTGTTGGAAGA 54315
||||| ||||| || || || || |||
Sbjct 334 ACGCCAGACATGATTGGCGTAGGCAGA 360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505300668378400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |