Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq955 84.2 5e-12 seq952 84.2 5e-12 >seq955 Length=33606 Score = 84.2 bits (92), Expect = 5e-12 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2823 TGCAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCCAACTGAGCTA 2882 || ||||||||||||| || || || ||||||||||| |||||||||||||||||||||| Sbjct 1438 TGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAACTGAGCTA 1497 Query 2883 A 2883 | Sbjct 1498 A 1498 >seq952 Length=33737 Score = 84.2 bits (92), Expect = 5e-12 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2823 TGCAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCCAACTGAGCTA 2882 || ||||||||||||| || || || ||||||||||| |||||||||||||||||||||| Sbjct 12077 TGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAACTGAGCTA 12136 Query 2883 A 2883 | Sbjct 12137 A 12137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123664565424888