Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq813 111 5e-20 >seq813 Length=55966 Score = 111 bits (122), Expect = 5e-20 Identities = 113/145 (78%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 21314 CCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCG-GCCGAACAAGCGACC 21372 || ||| | | |||||||||||| |||||||| ||||| || || ||||| ||| || || Sbjct 22976 CCGGTGGTGGCGCTGTCGCAGCTTAACCGCTCTCTGGAACAACGTGCCGA-CAAACGTCC 22918 Query 21373 GATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTT 21432 | | | || |||||||| || ||||| ||||||||||||| ||||| | |||||||| Sbjct 22917 GGTCAACTCCGACCTGCGTGAATCCGGCTCGATCGAGCAGGATGCCGACTTAATCATGTT 22858 Query 21433 CGTGTACCGCGACGAGGTCTACCAC 21457 | ||||| || ||||| || ||| Sbjct 22857 TATCTACCGTGATGAGGTTTATCAC 22833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157107052959316