Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq974 89.7 5e-13 >seq974 Length=31311 Score = 89.7 bits (98), Expect = 5e-13 Identities = 345/533 (65%), Gaps = 18/533 (3%) Strand=Plus/Plus Query 120386 TCACCAGACTCAATCAGTACGCAAGAGCTAAACTGACGGGTCGGGGTACGAACACCCGCC 120445 |||||| |||| ||||||||||| ||||| ||||||||||| ||||| || || || | | Sbjct 283 TCACCACACTCGATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGAC 342 Query 120446 ATGATCGGGGTCGGTAAAGACACCTTCATCAGCGATACGTTCTCGTACAGGTCAACAAT- 120504 ||||| || || || | ||| | ||| | | |||||| ||||| | ||| | Sbjct 343 ATGATTGGCGTAGGCAGAGAAATCTTGAACGTCGATACCGCATCGTAGA----AACGCTT 398 Query 120505 -ACGT--TCCAGACGGGTCTTTTTGTCTTCCTGTGACAACAGGCCCATTGCAATCAGCAT 120561 |||| ||||||||||| | | | || ||||||| || | ||| || Sbjct 399 CACGTAATCCAGACGGGTGTCACGCGGATAGTTAGAGAACAGGCAGGCGGCCACCAGAAT 458 Query 120562 -CAGCGCCATCTGAGGGGATTCATAAATCTCCCCGGTGACGCGGTGCTTGACCAGGTACT 120620 || | | ||| | | ||| || ||||| ||||| || |||| || |||||||| | Sbjct 459 ATAGAG-GAACTGGGCGCTTTCGTAGATCTCACCGGTTACACGGTTCTGAACCAGGTATT 517 Query 120621 TGTCTTCGTACTGACGCATTGCTGCGTAAGTGTAATCGAAGTCGCGGTCGTGAACGATCT 120680 || ||||| ||| || || ||||| | | | | | |||||| |||| |||| Sbjct 518 TGCCTTCGAGCTGCTTCACCGCCGCGTAGGAGAAGTTCATGTCGCGCCAGTGATCGATAA 577 Query 120681 TGTCATTCAGGAAAGCAATCTCATCACGGGTGTAATCGTCCAGCAGGTGGCGGTCGTACT 120740 | |||| | | ||| || || || || |||||||| || |||||| | Sbjct 578 ACCCGTTCATCTGCTCGAACTCTTCTTCCGTATAGTCTTCCAGCAGATGCGTGTCGTATT 637 Query 120741 TGCC---GTTGCCCACGTTCAGATAAATCTGATGGAACAGATCGAACGGCTGGAAATCAC 120797 |||| | ||| |||| | |||| | | || | ||||| || | | Sbjct 638 TGCCCAGCTCAACCATTTTCA---CCACGTGATCGTAAAGCTTCGGCGGCTCAAACTGGC 694 Query 120798 CATATGCCTCTTTGCGGATCTTGAACAGCAGCAGTCGTGCAGCAGCGTACTGGTAATCCG 120857 | || || | ||| || | | ||| | | ||| |||||||| |||||| ||||||| Sbjct 695 CGTAGGCTTTTTTACGCAGGTGGAAAATCGCCAGACGTGCAGCGAGGTACTGATAATCCG 754 Query 120858 GATTCTGAACACTA-ATCAGGTCGGATGCCGCCTTAATCAGGGTTTCGTGGAT 120909 | | || | | || ||||| | ||||| ||||| | ||||||||||| Sbjct 755 G-TGCTTCGCGGGAGATGAGGTCCGCCGCCGCTTTAATGATCGTTTCGTGGAT 806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477534891039920