Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_017974.1
Length=149273
Score E
Sequences producing significant alignments: (Bits) Value
seq974 89.7 5e-13
>seq974
Length=31311
Score = 89.7 bits (98), Expect = 5e-13
Identities = 345/533 (65%), Gaps = 18/533 (3%)
Strand=Plus/Plus
Query 120386 TCACCAGACTCAATCAGTACGCAAGAGCTAAACTGACGGGTCGGGGTACGAACACCCGCC 120445
|||||| |||| ||||||||||| ||||| ||||||||||| ||||| || || || | |
Sbjct 283 TCACCACACTCGATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGAC 342
Query 120446 ATGATCGGGGTCGGTAAAGACACCTTCATCAGCGATACGTTCTCGTACAGGTCAACAAT- 120504
||||| || || || | ||| | ||| | | |||||| ||||| | ||| |
Sbjct 343 ATGATTGGCGTAGGCAGAGAAATCTTGAACGTCGATACCGCATCGTAGA----AACGCTT 398
Query 120505 -ACGT--TCCAGACGGGTCTTTTTGTCTTCCTGTGACAACAGGCCCATTGCAATCAGCAT 120561
|||| ||||||||||| | | | || ||||||| || | ||| ||
Sbjct 399 CACGTAATCCAGACGGGTGTCACGCGGATAGTTAGAGAACAGGCAGGCGGCCACCAGAAT 458
Query 120562 -CAGCGCCATCTGAGGGGATTCATAAATCTCCCCGGTGACGCGGTGCTTGACCAGGTACT 120620
|| | | ||| | | ||| || ||||| ||||| || |||| || |||||||| |
Sbjct 459 ATAGAG-GAACTGGGCGCTTTCGTAGATCTCACCGGTTACACGGTTCTGAACCAGGTATT 517
Query 120621 TGTCTTCGTACTGACGCATTGCTGCGTAAGTGTAATCGAAGTCGCGGTCGTGAACGATCT 120680
|| ||||| ||| || || ||||| | | | | | |||||| |||| ||||
Sbjct 518 TGCCTTCGAGCTGCTTCACCGCCGCGTAGGAGAAGTTCATGTCGCGCCAGTGATCGATAA 577
Query 120681 TGTCATTCAGGAAAGCAATCTCATCACGGGTGTAATCGTCCAGCAGGTGGCGGTCGTACT 120740
| |||| | | ||| || || || || |||||||| || |||||| |
Sbjct 578 ACCCGTTCATCTGCTCGAACTCTTCTTCCGTATAGTCTTCCAGCAGATGCGTGTCGTATT 637
Query 120741 TGCC---GTTGCCCACGTTCAGATAAATCTGATGGAACAGATCGAACGGCTGGAAATCAC 120797
|||| | ||| |||| | |||| | | || | ||||| || | |
Sbjct 638 TGCCCAGCTCAACCATTTTCA---CCACGTGATCGTAAAGCTTCGGCGGCTCAAACTGGC 694
Query 120798 CATATGCCTCTTTGCGGATCTTGAACAGCAGCAGTCGTGCAGCAGCGTACTGGTAATCCG 120857
| || || | ||| || | | ||| | | ||| |||||||| |||||| |||||||
Sbjct 695 CGTAGGCTTTTTTACGCAGGTGGAAAATCGCCAGACGTGCAGCGAGGTACTGATAATCCG 754
Query 120858 GATTCTGAACACTA-ATCAGGTCGGATGCCGCCTTAATCAGGGTTTCGTGGAT 120909
| | || | | || ||||| | ||||| ||||| | |||||||||||
Sbjct 755 G-TGCTTCGCGGGAGATGAGGTCCGCCGCCGCTTTAATGATCGTTTCGTGGAT 806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477534891039920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |