Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_017981.1
Length=49981
Score E
Sequences producing significant alignments: (Bits) Value
seq986 403 6e-108
seq813 219 1e-52
>seq986
Length=30461
Score = 403 bits (446), Expect = 6e-108
Identities = 917/1371 (67%), Gaps = 14/1371 (1%)
Strand=Plus/Plus
Query 17380 TGAGATCCTTGTAGGCCAACCGGGCGGTAAGGGCAAAAACGTTAGCGCCCTTCGCTGCGA 17439
||| || ||||||| || || ||| ||| || | ||| | ||| || | |||
Sbjct 2726 TGAAATAATTGTAGGTCAGCCTCAGGGTGAGGCAGTAAGCATTAAAGACCTGCGATTCGA 2785
Query 17440 GTTCGATATTACGGCCACGTCCAGCAAGTCGCCAAATCAAGGAACGCTGAAGGTGTACAA 17499
|||||| || || || ||||||| | | || ||| | | || || | |||||
Sbjct 2786 GTTCGACATCACCAAAACAGCCAGCAAAACCGCCAACGAAGCATCACTCAAAATCTACAA 2845
Query 17500 CGCCGCACCTGACACGATAACCATGATGGAGACGGTAAATAACGTCGTCATCATCAAGGC 17559
||||||||| || || || |||||||||| ||||||||||| ||||||||||||||
Sbjct 2846 CGCCGCACCCACAACAATCACTCTGATGGAGACCGTAAATAACGTGGTCATCATCAAGGC 2905
Query 17560 CGGGTACACGGAGGACGTCGGAGCGGTCCAGATCTTTGCCGGTACGGTGTGCCGGTCACT 17619
||| ||| | || |||| || || ||||| | || || ||||| ||
Sbjct 2906 CGGCTACCTCAATGATATCGGCGCTATCACCATCTTCACAGGCACCACATGCCGTAGTCT 2965
Query 17620 GACATACCAGGATGGGCCGGACGTCATCACTGAGATGGAGTTGCGCGACAGCGTGATCCC 17679
|||||| |||||||| || ||| ||||||| || |||||||| | ||||| || || ||
Sbjct 2966 GACATATCAGGATGGTCCTGACATCATCACGGAAATGGAGTTAAGGGACAGTGTCATACC 3025
Query 17680 GCTCAGAGATGCAAAGGTGTCGATCAGCTATCCGCCGAACACCTCAGCGCTCACAGTGCT 17739
| | || || ||| | | || || || || || ||||| | ||||||||
Sbjct 3026 TTTACGCGACGCCAAGATTAGCGTTTCCTTCCCTCCAAATACGTCAGCAATGACAGTGCT 3085
Query 17740 GGATGGCGTGGCGAATAACTTTGGCCTGCCAATCCGCAAGAACCTGA---AGATCACCGA 17796
|||||| |||||||| ||||| || ||||||||| |||| | | | || | ||
Sbjct 3086 GGATGGGGTGGCGAAGAACTTCGGACTGCCAATCAAGAAGAGCATCAGCAAGGTTCAGGA 3145
Query 17797 CAAGCGTTACCCTTCAGGCTTTGCCTTTAATGGCCGCGTGCGCAACGCTATGGATCAGGT 17856
|||| ||| || | ||||| ||| || | || ||| | || ||||| |||
Sbjct 3146 TAAGCAGTACGTCGGCGGATATGCCTATAACGGAAGGGTTCGCGATGCCATGGACAGGGT 3205
Query 17857 TTGTAACTTCCTGGGGCTGGAGTGGAGCGCGCAGGGTAACGAGATCCAGATCATCAAGAA 17916
||||| | || |||||||||||||| || |||| || ||| || ||||| ||||| ||
Sbjct 3206 CTGTAATTATCTCGGGCTGGAGTGGAGTGCTCAGGATAGCGAAATACAGATTATCAAAAA 3265
Query 17917 GGGCGGCGTCTATTCAGATATGGCCGTTGACCTGAATGAGAACACGGGGATGATCGGATA 17976
||| ||||| ||| |||| | ||| || | ||| | |||| || |||||||||||
Sbjct 3266 GGGTGGCGTTTATGCAGACACGGCTGTCGTGCTGTCGAAAGACACTGGCATGATCGGATA 3325
Query 17977 CCCGCGCCGCGAGTCAAAAACGATGACGGAGAAGACGGCGGCAAAAGAGGGGCTGAAATA 18036
|| || || || ||||||| ||||| ||||||||||| || || |||| | |||||
Sbjct 3326 TCCCCGTCGTGAAGCAAAAACCATGACCGAGAAGACGGCAGCCAAGCAGGGCATCAAATA 3385
Query 18037 CGGCCAGAAGGGGATCGTCAGGACTACCATCGACGTTGCCGATCCAACCTCAAAACTGAA 18096
||| ||||| || ||||||||||| | || || | || || || |||| || ||
Sbjct 3386 CGGTCAGAAAGGCATCGTCAGGACGGTTGTGGATGTCGAAGACCCTACAGCAAAGCTCAA 3445
Query 18097 GGAAAAAACAACTCTTGAGGTGCAAGGATACCGCGTGCGCTCACTGATGAATGCAGCACT 18156
|| ||||||||| ||||| || ||||| ||| || || | || | || |
Sbjct 3446 AGACCGTGTAACTCTTGAAGTGCAGGGCTACCGGGTGAAGTCCCTCCTCAACCCTGCCAT 3505
Query 18157 TTACCCCGGCGCGTATGTTAAACTGACGTCGCGAGGCATTGAAGGGGCATTCTTTCGTGT 18216
||| || ||||| |||||| | || | || || || ||||| || | ||||| | ||
Sbjct 3506 TTATCCAGGCGCTTATGTTCAGCTTAAATCTCGCGGAATTGATGGAGAGTTCTTCAGGGT 3565
Query 18217 GGAAGAAGCGCATTATGTGGGCGACGTGGACGGCGGCGATTTCTACGTTGAGGTTTTATT 18276
|||||||| ||||| || || | |||| || | ||| || | ||||
Sbjct 3566 TGAAGAAGCACATTACACCGGAGATACGCACGGGCAGGAATGGAGCGTGGAAGCGCTATT 3625
Query 18277 GAGGTTTGTCTGATGGCAGATAATAGCGACGACGTAACAGCGCTGGAGAATTTCATAAAG 18336
||||||| ||||||||| ||||| || || | ||| |||||| ||| | |
Sbjct 3626 GAGGTTTATCTGATGGCTGATAACAGTGATGTAGTAGAAGCGCT-CAGA----CGGCTTG 3680
Query 18337 TCA--ACAGTTGTTGATTTCGTAAACACCTCCATCGAATGTGAGATCGTTTCGTATGAAA 18394
||| | | | || |||||||| | | |||| | || ||| |
Sbjct 3681 TCAGTTCGGAAATGGACACTGTAAACACGGCACTTCCATGTACCGTGGTGAGTTATTCAG 3740
Query 18395 ACGGGCGAGCGACTGTAAAGCC-GATCAACCAAAAGACTTATGACGACGGCGACAGCAAC 18453
|||| | || |||||||| ||| | | || | || | || ||||| | ||||
Sbjct 3741 GCGGGAAGGTAACGGTAAAGCCTGATGGA-GAGAAAATATACGCAGATGGCGATACCAAC 3799
Query 18454 GACTATCCGACGCTCCAGGGGTTGCGGATGCTTTGGCCGCAGTTTGATGGCGGCAAAGCT 18513
| |||||| |||| | || || ||| | ||||||||||||| ||| | ||
Sbjct 3800 GCCTATCCTGTGCTCAGCGATTTACGCATGGTGTGGCCGCAGTTTGCAAACGGTCAGGCC 3859
Query 18514 GGCGTTAAAGGCCCGGTTAAACCGGGCGATAAGTGCCTTCTTATTGTCTGCCAGCACGCA 18573
|| |||||||||| || | | || ||||| |||||| | | ||||||||||| |||
Sbjct 3860 GGATTTAAAGGCCCCGTCCAGGCTGGTGATAAATGCCTTTTGGTGGTCTGCCAGCAGGCA 3919
Query 18574 ATGGACGACAGCGGCGACAACCGCAAATACAGCCTGATTGACAGCTATGTTATTCCTGGT 18633
| || | ||||| ||||| | || | | | || ||| || ||||||||||||
Sbjct 3920 ACAGATGGCAGCGACGACACAAGACGATTCGACATCATCGACTCATACGTTATTCCTGGT 3979
Query 18634 GCCGGGTACGACGATTCTATTGCC-GGTAACGACGATATGAGGATCTATTACGGCGAGGC 18692
|| || || ||| | | |||| || ||||| || | ||||| |||| ||||| ||
Sbjct 3980 GCTGGTTATAGTGATGC-AGTGCCTGGCAACGATGACGTAAGGATGTATTTTGGCGATGC 4038
Query 18693 ATTCTTAGCAATCGGTGCCGATAAGAAGATCAAGATCAACGCGCCTGGCGG 18743
||| | || |||| ||| | ||| || | ||||| ||||| || ||
Sbjct 4039 CTTCATTGCTATCGACGCCAACGGGAAAATGACTATCAATGCGCCAGGAGG 4089
Score = 86.0 bits (94), Expect = 2e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 20537 TGCCACCCTGGGCTTGGGCGATGATGTTGTGATCCAGAGGATTTACGGCCACGTTTACGA 20596
||| || || ||| | || ||||| ||| | | ||| | ||||| || || | ||||
Sbjct 5942 TGCAACTCTCGGCCTTGGTGATGACGTTATCACCCAACGCATTTATGGTTACATCTACGC 6001
Query 20597 CAACACAACCGGCATTGCAAAAATGACAATCACTGCCAGCACAGACGGAACAACATT 20653
||| ||||||||||| | ||||||||| ||||| | |||||| |||||||| || ||
Sbjct 6002 CAATACAACCGGCATCGGAAAAATGACCATCACGGTCAGCACTGACGGAACTACGTT 6058
>seq813
Length=55966
Score = 219 bits (242), Expect = 1e-52
Identities = 247/330 (75%), Gaps = 3/330 (1%)
Strand=Plus/Plus
Query 25944 GCCGATCATCTGCATGGTTCCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAAC 26003
||| | |||||||||||| ||||||||||| ||||||| ||| |||||||| |||| |
Sbjct 13442 GCCCAGCATCTGCATGGTACCGCCAACGTTTACCACAACTTCGGTGGTGTACTTCTCAGC 13501
Query 26004 GCCGTCCTTTTC---CCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACC 26060
|||| || || ||| || ||||| |||||| || || || || ||||| |||||
Sbjct 13502 GCCGGACTGATCGGTCCATTTACGGGTGCGCAGTTGGCCTTCGATATAGACCTGAGAACC 13561
Query 26061 TTTCTTCAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCA 26120
||| ||| ||||| || || | || || | |||||||||||||| ||||| |||||
Sbjct 13562 TTTACGCAGATACTCACCGGCAACTTCTGCCAGTTTGCCAAACAGCACCACGCGGTGCCA 13621
Query 26121 TTCTGTCACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTAC 26180
||| ||| |||||| | || |||||| ||||| |||| ||| || || || |
Sbjct 13622 TTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTATCACGCCAGGATTCGGAAGTAGCCAG 13681
Query 26181 GGTAATGTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGTTCCCCAG 26240
||||||||||| |||||||| ||| | |||||||| || | || || || | |||||
Sbjct 13682 CGTAATGTTGGCAACTGCGCCACCACTCGGCATGTAGCGTACTTCCGGGTCCTGGCCCAG 13741
Query 26241 GTTACCGACAAGGATTACTTTATTTACGCC 26270
|||||||| || || || || ||||||||
Sbjct 13742 ATTACCGACGAGAATCACCTTGTTTACGCC 13771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159814195285804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |