Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_017985.1
Length=40128
Score E
Sequences producing significant alignments: (Bits) Value
seq986 857 0.0
seq997 230 6e-56
seq1102 95.1 3e-15
>seq986
Length=30461
Score = 857 bits (950), Expect = 0.0
Identities = 988/1330 (74%), Gaps = 0/1330 (0%)
Strand=Plus/Plus
Query 1467 TTACGCTTTAATATGTATTTAGGCCGCTGTTTGGTTTCTATGTAAATTCTACCAATATAT 1526
|||| |||||| | ||| |||||| ||| |||| || ||||| || ||||| ||
Sbjct 11744 TTACCCTTTAACAGGTAGCGAGGCCGTCCCTTGCTTTCGATATAAATCCTTCCAATGTAC 11803
Query 1527 TCTCCAAGAATACCTATTCCTATCAATTGAACGCCACCCAGGAAAAGAACAGAAACAAGA 1586
||||| || | ||| || || || | ||| || ||||| |||||||| | || |||||
Sbjct 11804 TCTCCGAGCACACCAATGCCGATAAGTTGCACACCACCAAGGAAAAGGATGGAGACAAGT 11863
Query 1587 AGAGACGGGTAGCCAGGAACATTATTTCCAAATATTAATTTATCAATAATCATCCATGCA 1646
| ||||| |||||| | ||| ||| ||||| | | || | ||||||||||||
Sbjct 11864 AATGACGGATAGCCACGCACAGCATTGCCAAAAGCCAGAGTGTCTACAATCATCCATGCG 11923
Query 1647 CCGTAAAGGAATGACATACCTGCAATAAACAATCCAATGTAAGTCCATATGCGGAGCGGA 1706
|| || || |||| | |||||||| || | || || || ||||| ||||| || ||
Sbjct 11924 CCATAGAGAAATGCGAGACCTGCAACAACAAGCCCGATATAGGTCCACATGCGCAGAGGG 11983
Query 1707 AATGTTGAGAAAGAAGTTATTCCTTCCAGCGCCAGATTCCATAATTTCCAGCCATTGAAT 1766
|| || |||||| || || || || || || || |||||||| ||||| ||||| |||
Sbjct 11984 AAGGTAGAGAAACTGGTGATACCCTCAAGAGCAAGGTTCCATAACTTCCAACCATTAAAT 12043
Query 1767 TTTGAATCGCCGGCAACACGTTCGGCACGGGCATATTTAACAACATCCGTTTTTCCGCCA 1826
|||| | ||| ||||| ||||| || |||||||||| |||||||||||| || |||
Sbjct 12044 TTTGTACTGCCTGCAACGCGTTCAGCGCGGGCATATTCAACAACATCCGTGCGACCACCA 12103
Query 1827 ACCCAACTGAGCACACCCTTCATAAACAAGTTGCGTTCTGGCATTTGTTTGATGTTCTCG 1886
||||| || || || |||||||| || | ||| | |||||||| | |||||||| |||
Sbjct 12104 ACCCAGCTCAGAACTCCCTTCATGAAGAGGTTTCTCTCTGGCATGAGCTTGATGTTTTCG 12163
Query 1887 ACAACCGCACGGCTCATTAACCGAAAGTCGCCAACATTTTCTTCGATTTTTGGATTGCTG 1946
|| ||| ||||| ||| | || || || || |||||||| ||||| | || || |||
Sbjct 12164 ACCACCTCACGGGACATCAGACGGAAATCACCGACATTTTCCTCGATCTGCGGGTTACTG 12223
Query 1947 ATTTTATTGTGCAGCTTATAAAACCACTCAGCTGTCTTACGCTTCAACCTCCCATCAGTT 2006
||||| ||||||| |||||| |||||||| || | ||||| |||| | | ||||||
Sbjct 12224 ATTTTGTTGTGCAACTTATAGAACCACTCGGCAGATTTACGTTTCAGACGACTATCAGTG 12283
Query 2007 GAGCGGTCTGAGCGCTTAGCCAGCACCATATCCGCGCCAGCCTGCCACTTCTCAATGAGA 2066
|||||||| |||||||| ||||| ||||| || || || |||||||| ||||| || |||
Sbjct 12284 GAGCGGTCAGAGCGCTTGGCCAGTACCATGTCGGCCCCGGCCTGCCATTTCTCTATCAGA 12343
Query 2067 TGGGGGATAACTTCTATCGGATCCTGTAAATCGACATCAATAGGAATGACCGCATCCCCG 2126
|| || || || || || || ||||| || || || ||||| || || | || || ||
Sbjct 12344 TGCGGAATGACCTCAATTGGGTCCTGCAAGTCTACGTCAATCGGGATAATTGCTTCACCT 12403
Query 2127 GTTGCATGGTCGAGACCCGCGAAAAGAGCAGGTTCTTTACCGAAGTTTCGCGTAAACGAA 2186
|| || ||||| || || ||||| | |||||| ||||| || ||||| || || || |||
Sbjct 12404 GTAGCGTGGTCTAGGCCGGCGAATAAAGCAGGCTCTTTTCCAAAGTTGCGGGTGAAGGAA 12463
Query 2187 AGCGGAATAACGAGCGGATCAGATGCAGCTATTTTGTTAATTATTGATTCAGTCGCATCT 2246
|| |||| || |||||||| | ||| | ||| || |||||||| |||||||||
Sbjct 12464 AGAGGAACCACAAGCGGATCTGCAATAGCAAGCGCGTTTATAATTGATTCGGTCGCATCT 12523
Query 2247 TTGCTTCCGTCGTTGATGAAAACAATCTCAACTTCATACGGTTTTAACTCTTCAAACTCG 2306
||||| ||||| |||||||| || ||||||||||| | | | |||||| ||||||||||
Sbjct 12524 TTGCTACCGTCATTGATGAAGACTATCTCAACTTCCTGCTGCTTTAACCCTTCAAACTCC 12583
Query 2307 CGAACCGTTTTATAGAAAATAGGTATCGTGGCTTCTTCATTGAAGACCGGAACGACTAAC 2366
|| || | ||| ||||| || || || | | |||||||| || ||||||||||| |
Sbjct 12584 CGCACGGCTTTGTAGAAGATTGGAATTGCTTCCTCTTCATTAAACACCGGAACGACCAGA 12643
Query 2367 GAGATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAAATGAATCCGCATATCA 2426
|| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||
Sbjct 12644 GAAATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAGATGAAGCCGCACACCA 12703
Query 2427 GGCTGATAGCTGAAAAGGTGACAAGAGTAAGGAGTGGCGGCAGGGAACATTTGTCAGCCA 2486
| ||||| || || || || | |||| | || | || ||||||||||
Sbjct 12704 GACTGATGGCGGAGAAAACGATTAACGTAATAATCGGGGCAAGCCCTGATTTGTCAGCAC 12763
Query 2487 TCCAGCCAACAACGGCGCTCAGTGTTCCCATAAATCCCACGTACATCATGTAGCGAAGCG 2546
||| ||||| |||||||||| || |||||||| || || |||| ||||||||| | |
Sbjct 12764 ACCAACCAACGGCGGCGCTCAGCGTACCCATAAACCCTACATACAGCATGTAGCGCATGG 12823
Query 2547 TGGTGGTGCTGGCGTTAAAGGTGAAGCGCGCATTGGCATAGAAGCTGAACGATACGGCGA 2606
| || || | ||||||||||| | || || || | ||||| || || || || |
Sbjct 12824 TCGTTGTAGAAGACTTAAAGGTGAACCTGGCGTTTGCGAAAAAGCTAAATGACACCGCAA 12883
Query 2607 TAACAAAACCGGAAAAGTTCGCCAGCGCCTGATGCGTATGCATCCCATACACACAAAAAG 2666
||||| |||| ||||| ||||| || || || || | | || | | ||| |
Sbjct 12884 CTACAAATCCGGCGAAGTTAGCCAGAGCTTGCCCTGTGTGGAAGACGTAAATAGAAATGG 12943
Query 2667 CAAATACGCCCCAATGAATAAGCGTGTTAAGAACACCGATCGATGTGTACTTAGCGAATA 2726
| || || |||| ||||| |||||||| | |||||| || ||||||||| | |||||||
Sbjct 12944 CGAACACAACCCAGTGAATGAGCGTGTTGATAACACCTATTGATGTGTACCTGGCGAATA 13003
Query 2727 ACTTCAACATTATGAAAATCAGCGGATTCGGAAAGGTCTGGAGTGTAGCACTACAAATTG 2786
|||| |||||||| ||||||| | ||||||||||||||| ||||||||| ||| ||
Sbjct 13004 ACTTTAACATTATAGAAATCAGTGAATTCGGAAAGGTCTGAAGTGTAGCATCACACATGC 13063
Query 2787 CTTTGATCGA 2796
||||||||
Sbjct 13064 ACTTGATCGA 13073
>seq997
Length=29618
Score = 230 bits (254), Expect = 6e-56
Identities = 259/343 (76%), Gaps = 8/343 (2%)
Strand=Plus/Minus
Query 21157 AAGGGCGCATGTGACCAGCTACGTCGCTGGACATACGCTGGCGGTAAGCAATGGAAAGGG 21216
|| |||||||| || | ||| || |||||||| | ||||| || || || |||||||||
Sbjct 18364 AAAGGCGCATGCGATCTGCTGCGGCGCTGGACTCATGCTGGAGGCAAACAGTGGAAAGGG 18305
Query 21217 CTGA-TGACTCGCCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAGCAATGAGCAGA 21275
||| | || ||||| |||| |||||| ||| |||| |||||| || ||||||| ||
Sbjct 18304 -TGAGTAACGCGCCGGGAGAATGAGCGCGAATTCTGCATGTGGGACCATAAATGAGCTGA 18246
Query 21276 GTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTT 21335
|||||||||| |||| |||| | ||||||||| | | |||| || | ||||| ||
Sbjct 18245 TTAACCGCGATCATCTGCGCTGTCGTTATCTGCCTGCTGGTCTTTATGGCTTGGGCGATT 18186
Query 21336 AATCATTACCGTGATAATGCAATCGCCTACAAAGAGCAGCGCGATAAAAAAGTCAGTG-- 21393
|| || || || || || || ||| |||||||||||||||||||| |||| || ||
Sbjct 18185 AACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGAT---AAAGCCACTGAG 18129
Query 21394 -AACTGAAGCAGGCGACCGCCACCATTACTGACATGCAGCAGCGCCAGCGTGATGCTGAT 21452
|||| | ||||| | ||||||||| | ||||||||| |||||||||||||| | |
Sbjct 18128 AAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGATGCCGCT 18069
Query 21453 GCACTCGATGCTAAATACACGAAGGAGTTAGCTGATGCGAAAG 21495
|| || ||||| |||||||| || |||||||||||||
Sbjct 18068 GCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAG 18026
>seq1102
Length=22075
Score = 95.1 bits (104), Expect = 3e-15
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 3025 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAGTTAAATCAAATAC 3084
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2274 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATCTAAATCAATAAG 2215
Query 3085 TTACGTA 3091
||| |||
Sbjct 2214 TTATGTA 2208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128285266984520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |