Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq974 178 9e-40 >seq974 Length=31311 Score = 178 bits (196), Expect = 9e-40 Identities = 253/356 (71%), Gaps = 0/356 (0%) Strand=Plus/Minus Query 71158 CCAACACCTATTATGGGTGGTGTACGTACTCCAACAAGACAATTTAGTAGTTGTGTAAAG 71217 || || || || ||| ||| || || || ||||| | || || || || ||| | Sbjct 356 CCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGTACTG 297 Query 71218 ATTGACAGTGGCGATAGCCTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTTAAGTAT 71277 || || |||| || ||||| ||||| || || ||| | || || | || || || || Sbjct 296 ATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATCGTGAAATAC 237 Query 71278 GTATCCAAACGTGCAGGTATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGAAGTCCT 71337 || ||| | ||||| |||||||| ||||| | || || ||||| | || || || Sbjct 236 GTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTGGGCAGCCCG 177 Query 71338 ATACGCAATGGTGAAGCAGTTCATACTGGTTTAATACCATTCTTAAAGCATTTCCAAACA 71397 || ||| ||||||||| | || || || | || || |||| ||||| ||||| || Sbjct 176 ATTCGCGGCGGTGAAGCATTCCACACCGGCTGTATCCCGTTCTATAAGCACTTCCAGACG 117 Query 71398 GCAGTCAAATCTTGCTCTCAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTCTACCCT 71457 || || ||||| ||||||||||| ||| | || || |||||||| || |||||||||| Sbjct 116 GCGGTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGACCCTGTTCTACCCT 57 Query 71458 ATGTGGCATTTAGAAGTTGAAAGCCTTTTAGTATTGAAAAATAACAAAGGTGTTGA 71513 |||||||| | ||||| |||||||| | || ||||||| ||| |||||||| Sbjct 56 ATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTCCTGAAAAACAACCGTGGTGTTGA 1 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 70591 GATAAGATCCATAAAGTAATCGCATGGGCTGCAGAGGGACTTGAAAATGTCTCAGTATCT 70650 || || |||||| ||| ||| ||||| ||||| ||||| | || || || | || Sbjct 920 GACAAAATCCATCGAGTTCTCGACTGGGCAGCAGAAGGACTGAACAACGTATCTATCTCC 861 Query 70651 CAAGTTGAATTGAAATCTCATATCCAATTTTATGAAGGTATGAAGACAGAAGATATTCAC 70710 || |||||| || || || ||||| || || || || || || || ||||| ||| Sbjct 860 CAGGTTGAACTGCGTTCACACATCCAGTTCTACGACGGCATCAAAACGTCTGATATCCAC 801 Query 70711 GAAATAATCATTAAAGCAGCAGCAGATTTAATATCGGTTGACACTCCTGATTATCAGTAT 70770 |||| ||||||||||| || || || | || || || | || ||||||||||| Sbjct 800 GAAACGATCATTAAAGCGGCGGCGGACCTCATCTCCCGCGAAGCACCGGATTATCAGTAC 741 Query 70771 CTCTCATCTCGTTTAGCCGTATTTCATTTACGTAAACAAGCCTATGGTGATTTTG 70825 ||| | | ||| | || | || || | |||||| ||||||| || | |||| Sbjct 740 CTCGCTGCACGTCTGGCGATTTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTG 686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335663060776498