Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq813 105 3e-18 >seq813 Length=55966 Score = 105 bits (116), Expect = 3e-18 Identities = 175/253 (69%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 9972 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 10031 ||| ||||| || || |||||||| ||||| ||| ||||||||| |||||| | || Sbjct 13769 CGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCC 13710 Query 10032 GAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGACAAGGC 10091 ||| || | |||| | ||||||| || ||||| |||| || || || || Sbjct 13709 GAGTGGTGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGC 13650 Query 10092 GAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGC 10151 || ||| |||||||| || ||| |||||||||||||| | || ||| || || Sbjct 13649 GACCGGTGAGATGAAAGAGCAGACTGAATGGCACCGCGTGGTGCTGTTTGGCAAACTGGC 13590 Query 10152 CGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCATCCG 10211 || | | || ||||| ||||| || || | | |||||| ||||| |||| | || Sbjct 13589 AGAAGTTGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATCGAAGGCCAACTGCG 13530 Query 10212 CACGCGGAAGTGG 10224 ||| || || ||| Sbjct 13529 CACCCGTAAATGG 13517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197784586356852